Analysis of interatomic Contacts of Structural Units in PDB entry:
8E6O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8E6O entry

There are 3 chains in PDB entry 8E6O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 498THR 662
B
 ILE 498THR 662
C
 ILE 498THR 662
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 8E6O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
513 531Right-handed alpha
Helix 2
AA2
A
535 544Right-handed alpha
Helix 3
AA3
A
583 586Right-handed 310
Helix 4
AA4
A
589 604Right-handed alpha
Helix 5
AA5
A
618 625Right-handed alpha
Helix 6
AA6
A
634 639Right-handed alpha
Helix 7
AA7
B
513 531Right-handed alpha
Helix 8
AA8
B
535 544Right-handed alpha
Helix 9
AA9
B
583 586Right-handed 310
Helix 10
AB1
B
589 605Right-handed alpha
Helix 11
AB2
B
618 625Right-handed alpha
Helix 12
AB3
B
634 639Right-handed alpha
Helix 13
AB4
C
513 531Right-handed alpha
Helix 14
AB5
C
535 544Right-handed alpha
Helix 15
AB6
C
583 586Right-handed 310
Helix 16
AB7
C
589 605Right-handed alpha
Helix 17
AB8
C
618 625Right-handed alpha
Helix 18
AB9
C
634 639Right-handed alpha
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There are 3 sheets in PDB entry 8E6O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
499 504first strand
Strand 2
A
549 555anti-parallel
Strand 3
A
558 568anti-parallel
Strand 4
A
573 581anti-parallel
Strand 5
A
609 614parallel
Strand 6
A
649 654anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
499 504first strand
Strand 2
B
548 555anti-parallel
Strand 3
B
558 568anti-parallel
Strand 4
B
573 581anti-parallel
Strand 5
B
609 614parallel
Strand 6
B
649 654anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
499 504first strand
Strand 2
C
548 555anti-parallel
Strand 3
C
558 568anti-parallel
Strand 4
C
573 581anti-parallel
Strand 5
C
609 614parallel
Strand 6
C
649 654anti-parallel
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