Analysis of interatomic Contacts of Structural Units in PDB entry:
8E6R

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8E6R entry

There are 4 chains in PDB entry 8E6R (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 67	TYR 1503
B	ILE 67	TYR 1503
C	ILE 67	TYR 1503
D	ILE 67	TYR 1503

There are204 helices in PDB entry 8E6R. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	154	159	Right-handed alpha
Helix 2	AA2	A	185	200	Right-handed alpha
Helix 3	AA3	A	213	218	Right-handed alpha
Helix 4	AA4	A	218	223	Right-handed alpha
Helix 5	AA5	A	223	228	Right-handed alpha
Helix 6	AA6	A	301	312	Right-handed alpha
Helix 7	AA7	A	333	347	Right-handed alpha
Helix 8	AA8	A	375	383	Right-handed alpha
Helix 9	AA9	A	402	411	Right-handed alpha
Helix 10	AB1	A	428	443	Right-handed alpha
Helix 11	AB2	A	450	460	Right-handed alpha
Helix 12	AB3	A	464	472	Right-handed alpha
Helix 13	AB4	A	483	491	Right-handed alpha
Helix 14	AB5	A	496	506	Right-handed alpha
Helix 15	AB6	A	509	514	Right-handed alpha
Helix 16	AB7	A	515	525	Right-handed alpha
Helix 17	AB8	A	530	543	Right-handed alpha
Helix 18	AB9	A	558	569	Right-handed alpha
Helix 19	AC1	A	580	584	Right-handed 310
Helix 20	AC2	A	621	632	Right-handed alpha
Helix 21	AC3	A	634	643	Right-handed alpha
Helix 22	AC4	A	649	666	Right-handed alpha
Helix 23	AC5	A	671	696	Right-handed alpha
Helix 24	AC6	A	697	705	Right-handed alpha
Helix 25	AC7	A	719	724	Right-handed alpha
Helix 26	AC8	A	734	743	Right-handed alpha
Helix 27	AC9	A	756	762	Right-handed alpha
Helix 28	AD1	A	763	768	Right-handed 310
Helix 29	AD2	A	773	778	Right-handed alpha
Helix 30	AD3	A	783	794	Right-handed alpha
Helix 31	AD4	A	794	819	Right-handed alpha
Helix 32	AD5	A	828	833	Right-handed 310
Helix 33	AD6	A	834	848	Right-handed alpha
Helix 34	AD7	A	859	865	Right-handed alpha
Helix 35	AD8	A	866	888	Right-handed alpha
Helix 36	AD9	A	891	914	Right-handed alpha
Helix 37	AE1	A	920	928	Right-handed alpha
Helix 38	AE2	A	930	956	Right-handed alpha
Helix 39	AE3	A	971	976	Right-handed alpha
Helix 40	AE4	A	983	988	Right-handed alpha
Helix 41	AE5	A	1022	1038	Right-handed alpha
Helix 42	AE6	A	1038	1055	Right-handed alpha
Helix 43	AE7	A	1055	1075	Right-handed alpha
Helix 44	AE8	A	1084	1097	Right-handed alpha
Helix 45	AE9	A	1114	1142	Right-handed alpha
Helix 46	AF1	A	1145	1160	Right-handed alpha
Helix 47	AF2	A	1258	1262	Right-handed 310
Helix 48	AF3	A	1456	1461	Right-handed alpha
Helix 49	AF4	A	1462	1464	Right-handed 310
Helix 50	AF5	A	1485	1496	Right-handed alpha
Helix 51	AF6	A	1497	1499	Right-handed 310
Helix 52	AF7	B	154	159	Right-handed alpha
Helix 53	AF8	B	185	200	Right-handed alpha
Helix 54	AF9	B	213	218	Right-handed alpha
Helix 55	AG1	B	218	223	Right-handed alpha
Helix 56	AG2	B	223	228	Right-handed alpha
Helix 57	AG3	B	301	312	Right-handed alpha
Helix 58	AG4	B	333	347	Right-handed alpha
Helix 59	AG5	B	375	383	Right-handed alpha
Helix 60	AG6	B	402	411	Right-handed alpha
Helix 61	AG7	B	428	443	Right-handed alpha
Helix 62	AG8	B	450	460	Right-handed alpha
Helix 63	AG9	B	464	472	Right-handed alpha
Helix 64	AH1	B	483	491	Right-handed alpha
Helix 65	AH2	B	496	506	Right-handed alpha
Helix 66	AH3	B	509	514	Right-handed alpha
Helix 67	AH4	B	515	525	Right-handed alpha
Helix 68	AH5	B	530	543	Right-handed alpha
Helix 69	AH6	B	558	569	Right-handed alpha
Helix 70	AH7	B	580	584	Right-handed 310
Helix 71	AH8	B	621	632	Right-handed alpha
Helix 72	AH9	B	634	643	Right-handed alpha
Helix 73	AI1	B	649	666	Right-handed alpha
Helix 74	AI2	B	671	696	Right-handed alpha
Helix 75	AI3	B	697	705	Right-handed alpha
Helix 76	AI4	B	719	724	Right-handed alpha
Helix 77	AI5	B	734	743	Right-handed alpha
Helix 78	AI6	B	756	762	Right-handed alpha
Helix 79	AI7	B	763	768	Right-handed 310
Helix 80	AI8	B	773	778	Right-handed alpha
Helix 81	AI9	B	783	794	Right-handed alpha
Helix 82	AJ1	B	794	819	Right-handed alpha
Helix 83	AJ2	B	828	833	Right-handed 310
Helix 84	AJ3	B	834	848	Right-handed alpha
Helix 85	AJ4	B	859	865	Right-handed alpha
Helix 86	AJ5	B	866	888	Right-handed alpha
Helix 87	AJ6	B	891	914	Right-handed alpha
Helix 88	AJ7	B	920	928	Right-handed alpha
Helix 89	AJ8	B	930	956	Right-handed alpha
Helix 90	AJ9	B	971	976	Right-handed alpha
Helix 91	AK1	B	983	988	Right-handed alpha
Helix 92	AK2	B	1022	1038	Right-handed alpha
Helix 93	AK3	B	1038	1055	Right-handed alpha
Helix 94	AK4	B	1055	1075	Right-handed alpha
Helix 95	AK5	B	1084	1097	Right-handed alpha
Helix 96	AK6	B	1114	1142	Right-handed alpha
Helix 97	AK7	B	1145	1160	Right-handed alpha
Helix 98	AK8	B	1258	1262	Right-handed 310
Helix 99	AK9	B	1456	1461	Right-handed alpha
Helix 100	AL1	B	1462	1464	Right-handed 310
Helix 101	AL2	B	1485	1496	Right-handed alpha
Helix 102	AL3	B	1497	1499	Right-handed 310
Helix 103	AL4	C	154	159	Right-handed alpha
Helix 104	AL5	C	185	200	Right-handed alpha
Helix 105	AL6	C	213	218	Right-handed alpha
Helix 106	AL7	C	218	223	Right-handed alpha
Helix 107	AL8	C	223	228	Right-handed alpha
Helix 108	AL9	C	301	312	Right-handed alpha
Helix 109	AM1	C	333	347	Right-handed alpha
Helix 110	AM2	C	375	383	Right-handed alpha
Helix 111	AM3	C	402	411	Right-handed alpha
Helix 112	AM4	C	428	443	Right-handed alpha
Helix 113	AM5	C	450	460	Right-handed alpha
Helix 114	AM6	C	464	472	Right-handed alpha
Helix 115	AM7	C	483	491	Right-handed alpha
Helix 116	AM8	C	496	506	Right-handed alpha
Helix 117	AM9	C	509	514	Right-handed alpha
Helix 118	AN1	C	515	525	Right-handed alpha
Helix 119	AN2	C	530	543	Right-handed alpha
Helix 120	AN3	C	558	569	Right-handed alpha
Helix 121	AN4	C	580	584	Right-handed 310
Helix 122	AN5	C	621	632	Right-handed alpha
Helix 123	AN6	C	634	643	Right-handed alpha
Helix 124	AN7	C	649	666	Right-handed alpha
Helix 125	AN8	C	671	696	Right-handed alpha
Helix 126	AN9	C	697	705	Right-handed alpha
Helix 127	AO1	C	719	724	Right-handed alpha
Helix 128	AO2	C	734	743	Right-handed alpha
Helix 129	AO3	C	756	762	Right-handed alpha
Helix 130	AO4	C	763	768	Right-handed 310
Helix 131	AO5	C	773	778	Right-handed alpha
Helix 132	AO6	C	783	794	Right-handed alpha
Helix 133	AO7	C	794	819	Right-handed alpha
Helix 134	AO8	C	828	833	Right-handed 310
Helix 135	AO9	C	834	848	Right-handed alpha
Helix 136	AP1	C	859	865	Right-handed alpha
Helix 137	AP2	C	866	888	Right-handed alpha
Helix 138	AP3	C	891	914	Right-handed alpha
Helix 139	AP4	C	920	928	Right-handed alpha
Helix 140	AP5	C	930	956	Right-handed alpha
Helix 141	AP6	C	971	976	Right-handed alpha
Helix 142	AP7	C	983	988	Right-handed alpha
Helix 143	AP8	C	1022	1038	Right-handed alpha
Helix 144	AP9	C	1038	1055	Right-handed alpha
Helix 145	AQ1	C	1055	1075	Right-handed alpha
Helix 146	AQ2	C	1084	1097	Right-handed alpha
Helix 147	AQ3	C	1114	1142	Right-handed alpha
Helix 148	AQ4	C	1145	1160	Right-handed alpha
Helix 149	AQ5	C	1258	1262	Right-handed 310
Helix 150	AQ6	C	1456	1461	Right-handed alpha
Helix 151	AQ7	C	1462	1464	Right-handed 310
Helix 152	AQ8	C	1485	1496	Right-handed alpha
Helix 153	AQ9	C	1497	1499	Right-handed 310
Helix 154	AR1	D	154	159	Right-handed alpha
Helix 155	AR2	D	185	200	Right-handed alpha
Helix 156	AR3	D	213	218	Right-handed alpha
Helix 157	AR4	D	218	223	Right-handed alpha
Helix 158	AR5	D	223	228	Right-handed alpha
Helix 159	AR6	D	301	312	Right-handed alpha
Helix 160	AR7	D	333	347	Right-handed alpha
Helix 161	AR8	D	375	383	Right-handed alpha
Helix 162	AR9	D	402	411	Right-handed alpha
Helix 163	AS1	D	428	443	Right-handed alpha
Helix 164	AS2	D	450	460	Right-handed alpha
Helix 165	AS3	D	464	472	Right-handed alpha
Helix 166	AS4	D	483	491	Right-handed alpha
Helix 167	AS5	D	496	506	Right-handed alpha
Helix 168	AS6	D	509	514	Right-handed alpha
Helix 169	AS7	D	515	525	Right-handed alpha
Helix 170	AS8	D	530	543	Right-handed alpha
Helix 171	AS9	D	558	569	Right-handed alpha
Helix 172	AT1	D	580	584	Right-handed 310
Helix 173	AT2	D	621	632	Right-handed alpha
Helix 174	AT3	D	634	643	Right-handed alpha
Helix 175	AT4	D	649	666	Right-handed alpha
Helix 176	AT5	D	671	696	Right-handed alpha
Helix 177	AT6	D	697	705	Right-handed alpha
Helix 178	AT7	D	719	724	Right-handed alpha
Helix 179	AT8	D	734	743	Right-handed alpha
Helix 180	AT9	D	756	762	Right-handed alpha
Helix 181	AU1	D	763	768	Right-handed 310
Helix 182	AU2	D	773	778	Right-handed alpha
Helix 183	AU3	D	783	794	Right-handed alpha
Helix 184	AU4	D	794	819	Right-handed alpha
Helix 185	AU5	D	828	833	Right-handed 310
Helix 186	AU6	D	834	848	Right-handed alpha
Helix 187	AU7	D	859	865	Right-handed alpha
Helix 188	AU8	D	866	888	Right-handed alpha
Helix 189	AU9	D	891	914	Right-handed alpha
Helix 190	AV1	D	920	928	Right-handed alpha
Helix 191	AV2	D	930	956	Right-handed alpha
Helix 192	AV3	D	971	976	Right-handed alpha
Helix 193	AV4	D	983	988	Right-handed alpha
Helix 194	AV5	D	1022	1038	Right-handed alpha
Helix 195	AV6	D	1038	1055	Right-handed alpha
Helix 196	AV7	D	1055	1075	Right-handed alpha
Helix 197	AV8	D	1084	1097	Right-handed alpha
Helix 198	AV9	D	1114	1142	Right-handed alpha
Helix 199	AW1	D	1145	1160	Right-handed alpha
Helix 200	AW2	D	1258	1262	Right-handed 310
Helix 201	AW3	D	1456	1461	Right-handed alpha
Helix 202	AW4	D	1462	1464	Right-handed 310
Helix 203	AW5	D	1485	1496	Right-handed alpha
Helix 204	AW6	D	1497	1499	Right-handed 310

There are 16 sheets in PDB entry 8E6R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	239	243	first strand
Strand 2	A	283	287	parallel
Strand 3	A	140	144	parallel
Strand 4	A	127	132	anti-parallel
Strand 5	A	262	264	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	170	175	first strand
Strand 2	A	325	330	parallel
Strand 3	A	350	353	parallel
Strand 4	A	416	419	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1343	1347	first strand
Strand 2	A	1438	1442	parallel
Strand 3	A	1427	1428	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1422	1423	first strand
Strand 2	A	1445	1449	anti-parallel
Strand 3	A	1351	1355	parallel
Strand 4	A	1372	1376	anti-parallel
Strand 5	A	1474	1477	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	239	243	first strand
Strand 2	B	283	287	parallel
Strand 3	B	140	144	parallel
Strand 4	B	127	132	anti-parallel
Strand 5	B	262	264	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	170	175	first strand
Strand 2	B	325	330	parallel
Strand 3	B	350	353	parallel
Strand 4	B	416	419	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1343	1347	first strand
Strand 2	B	1438	1442	parallel
Strand 3	B	1427	1428	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1422	1423	first strand
Strand 2	B	1445	1449	anti-parallel
Strand 3	B	1351	1355	parallel
Strand 4	B	1372	1376	anti-parallel
Strand 5	B	1474	1477	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	239	243	first strand
Strand 2	C	283	287	parallel
Strand 3	C	140	144	parallel
Strand 4	C	127	132	anti-parallel
Strand 5	C	262	264	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	170	175	first strand
Strand 2	C	325	330	parallel
Strand 3	C	350	353	parallel
Strand 4	C	416	419	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1343	1347	first strand
Strand 2	C	1438	1442	parallel
Strand 3	C	1427	1428	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1422	1423	first strand
Strand 2	C	1445	1449	anti-parallel
Strand 3	C	1351	1355	parallel
Strand 4	C	1372	1376	anti-parallel
Strand 5	C	1474	1477	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	239	243	first strand
Strand 2	D	283	287	parallel
Strand 3	D	140	144	parallel
Strand 4	D	127	132	anti-parallel
Strand 5	D	262	264	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	170	175	first strand
Strand 2	D	325	330	parallel
Strand 3	D	350	353	parallel
Strand 4	D	416	419	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1343	1347	first strand
Strand 2	D	1438	1442	parallel
Strand 3	D	1427	1428	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1422	1423	first strand
Strand 2	D	1445	1449	anti-parallel
Strand 3	D	1351	1355	parallel
Strand 4	D	1372	1376	anti-parallel
Strand 5	D	1474	1477	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8E6R

Analysis of interatomic Contacts of Structural Units in PDB entry:
8E6R