Analysis of interatomic Contacts of Structural Units in PDB entry:
8E6S

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8E6S entry

There are 4 chains in PDB entry 8E6S (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 60	TYR 1503
B	SER 60	TYR 1503
C	SER 60	TYR 1503
D	SER 60	TYR 1503

There are236 helices in PDB entry 8E6S. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	114	118	Right-handed 310
Helix 2	AA2	A	150	161	Right-handed alpha
Helix 3	AA3	A	183	200	Right-handed alpha
Helix 4	AA4	A	213	227	Right-handed alpha
Helix 5	AA5	A	245	247	Right-handed 310
Helix 6	AA6	A	298	312	Right-handed alpha
Helix 7	AA7	A	315	319	Right-handed 310
Helix 8	AA8	A	333	347	Right-handed alpha
Helix 9	AA9	A	359	365	Right-handed alpha
Helix 10	AB1	A	375	382	Right-handed alpha
Helix 11	AB2	A	395	400	Right-handed alpha
Helix 12	AB3	A	400	412	Right-handed alpha
Helix 13	AB4	A	429	442	Right-handed alpha
Helix 14	AB5	A	451	462	Right-handed alpha
Helix 15	AB6	A	464	473	Right-handed alpha
Helix 16	AB7	A	480	483	Right-handed 310
Helix 17	AB8	A	484	495	Right-handed alpha
Helix 18	AB9	A	496	507	Right-handed alpha
Helix 19	AC1	A	515	525	Right-handed alpha
Helix 20	AC2	A	530	543	Right-handed alpha
Helix 21	AC3	A	557	567	Right-handed alpha
Helix 22	AC4	A	580	584	Right-handed 310
Helix 23	AC5	A	594	598	Right-handed 310
Helix 24	AC6	A	620	631	Right-handed alpha
Helix 25	AC7	A	635	643	Right-handed alpha
Helix 26	AC8	A	649	666	Right-handed alpha
Helix 27	AC9	A	671	696	Right-handed alpha
Helix 28	AD1	A	697	705	Right-handed alpha
Helix 29	AD2	A	714	717	Right-handed 310
Helix 30	AD3	A	718	724	Right-handed alpha
Helix 31	AD4	A	728	732	Right-handed 310
Helix 32	AD5	A	733	744	Right-handed alpha
Helix 33	AD6	A	752	762	Right-handed alpha
Helix 34	AD7	A	763	768	Right-handed 310
Helix 35	AD8	A	773	778	Right-handed alpha
Helix 36	AD9	A	783	793	Right-handed alpha
Helix 37	AE1	A	794	819	Right-handed alpha
Helix 38	AE2	A	826	850	Right-handed alpha
Helix 39	AE3	A	856	865	Right-handed alpha
Helix 40	AE4	A	866	888	Right-handed alpha
Helix 41	AE5	A	889	892	Right-handed 310
Helix 42	AE6	A	893	913	Right-handed alpha
Helix 43	AE7	A	919	934	Right-handed alpha
Helix 44	AE8	A	934	953	Right-handed alpha
Helix 45	AE9	A	954	956	Right-handed 310
Helix 46	AF1	A	964	969	Right-handed alpha
Helix 47	AF2	A	983	987	Right-handed 310
Helix 48	AF3	A	1023	1040	Right-handed alpha
Helix 49	AF4	A	1040	1049	Right-handed alpha
Helix 50	AF5	A	1054	1075	Right-handed alpha
Helix 51	AF6	A	1081	1083	Right-handed 310
Helix 52	AF7	A	1084	1097	Right-handed alpha
Helix 53	AF8	A	1114	1143	Right-handed alpha
Helix 54	AF9	A	1143	1163	Right-handed alpha
Helix 55	AG1	A	1258	1262	Right-handed 310
Helix 56	AG2	A	1410	1419	Right-handed alpha
Helix 57	AG3	A	1454	1464	Right-handed alpha
Helix 58	AG4	A	1485	1496	Right-handed alpha
Helix 59	AG5	A	1497	1499	Right-handed 310
Helix 60	AG6	B	114	118	Right-handed 310
Helix 61	AG7	B	150	161	Right-handed alpha
Helix 62	AG8	B	183	200	Right-handed alpha
Helix 63	AG9	B	213	227	Right-handed alpha
Helix 64	AH1	B	245	247	Right-handed 310
Helix 65	AH2	B	298	312	Right-handed alpha
Helix 66	AH3	B	315	319	Right-handed 310
Helix 67	AH4	B	333	347	Right-handed alpha
Helix 68	AH5	B	359	365	Right-handed alpha
Helix 69	AH6	B	375	382	Right-handed alpha
Helix 70	AH7	B	395	400	Right-handed alpha
Helix 71	AH8	B	400	412	Right-handed alpha
Helix 72	AH9	B	429	442	Right-handed alpha
Helix 73	AI1	B	451	462	Right-handed alpha
Helix 74	AI2	B	464	473	Right-handed alpha
Helix 75	AI3	B	480	483	Right-handed 310
Helix 76	AI4	B	484	495	Right-handed alpha
Helix 77	AI5	B	496	507	Right-handed alpha
Helix 78	AI6	B	515	525	Right-handed alpha
Helix 79	AI7	B	530	543	Right-handed alpha
Helix 80	AI8	B	557	567	Right-handed alpha
Helix 81	AI9	B	580	584	Right-handed 310
Helix 82	AJ1	B	594	598	Right-handed 310
Helix 83	AJ2	B	620	631	Right-handed alpha
Helix 84	AJ3	B	635	643	Right-handed alpha
Helix 85	AJ4	B	649	666	Right-handed alpha
Helix 86	AJ5	B	671	696	Right-handed alpha
Helix 87	AJ6	B	697	705	Right-handed alpha
Helix 88	AJ7	B	714	717	Right-handed 310
Helix 89	AJ8	B	718	724	Right-handed alpha
Helix 90	AJ9	B	728	732	Right-handed 310
Helix 91	AK1	B	733	744	Right-handed alpha
Helix 92	AK2	B	752	762	Right-handed alpha
Helix 93	AK3	B	763	768	Right-handed 310
Helix 94	AK4	B	773	778	Right-handed alpha
Helix 95	AK5	B	783	793	Right-handed alpha
Helix 96	AK6	B	794	819	Right-handed alpha
Helix 97	AK7	B	826	850	Right-handed alpha
Helix 98	AK8	B	856	865	Right-handed alpha
Helix 99	AK9	B	866	888	Right-handed alpha
Helix 100	AL1	B	889	892	Right-handed 310
Helix 101	AL2	B	893	913	Right-handed alpha
Helix 102	AL3	B	919	934	Right-handed alpha
Helix 103	AL4	B	934	953	Right-handed alpha
Helix 104	AL5	B	954	956	Right-handed 310
Helix 105	AL6	B	964	969	Right-handed alpha
Helix 106	AL7	B	983	987	Right-handed 310
Helix 107	AL8	B	1023	1040	Right-handed alpha
Helix 108	AL9	B	1040	1049	Right-handed alpha
Helix 109	AM1	B	1054	1075	Right-handed alpha
Helix 110	AM2	B	1081	1083	Right-handed 310
Helix 111	AM3	B	1084	1097	Right-handed alpha
Helix 112	AM4	B	1114	1143	Right-handed alpha
Helix 113	AM5	B	1143	1163	Right-handed alpha
Helix 114	AM6	B	1258	1262	Right-handed 310
Helix 115	AM7	B	1410	1419	Right-handed alpha
Helix 116	AM8	B	1454	1464	Right-handed alpha
Helix 117	AM9	B	1485	1496	Right-handed alpha
Helix 118	AN1	B	1497	1499	Right-handed 310
Helix 119	AN2	C	114	118	Right-handed 310
Helix 120	AN3	C	150	161	Right-handed alpha
Helix 121	AN4	C	183	200	Right-handed alpha
Helix 122	AN5	C	213	227	Right-handed alpha
Helix 123	AN6	C	245	247	Right-handed 310
Helix 124	AN7	C	298	312	Right-handed alpha
Helix 125	AN8	C	315	319	Right-handed 310
Helix 126	AN9	C	333	347	Right-handed alpha
Helix 127	AO1	C	359	365	Right-handed alpha
Helix 128	AO2	C	375	382	Right-handed alpha
Helix 129	AO3	C	395	400	Right-handed alpha
Helix 130	AO4	C	400	412	Right-handed alpha
Helix 131	AO5	C	429	442	Right-handed alpha
Helix 132	AO6	C	451	462	Right-handed alpha
Helix 133	AO7	C	464	473	Right-handed alpha
Helix 134	AO8	C	480	483	Right-handed 310
Helix 135	AO9	C	484	495	Right-handed alpha
Helix 136	AP1	C	496	507	Right-handed alpha
Helix 137	AP2	C	515	525	Right-handed alpha
Helix 138	AP3	C	530	543	Right-handed alpha
Helix 139	AP4	C	557	567	Right-handed alpha
Helix 140	AP5	C	580	584	Right-handed 310
Helix 141	AP6	C	594	598	Right-handed 310
Helix 142	AP7	C	620	631	Right-handed alpha
Helix 143	AP8	C	635	643	Right-handed alpha
Helix 144	AP9	C	649	666	Right-handed alpha
Helix 145	AQ1	C	671	696	Right-handed alpha
Helix 146	AQ2	C	697	705	Right-handed alpha
Helix 147	AQ3	C	714	717	Right-handed 310
Helix 148	AQ4	C	718	724	Right-handed alpha
Helix 149	AQ5	C	728	732	Right-handed 310
Helix 150	AQ6	C	733	744	Right-handed alpha
Helix 151	AQ7	C	752	762	Right-handed alpha
Helix 152	AQ8	C	763	768	Right-handed 310
Helix 153	AQ9	C	773	778	Right-handed alpha
Helix 154	AR1	C	783	793	Right-handed alpha
Helix 155	AR2	C	794	819	Right-handed alpha
Helix 156	AR3	C	826	850	Right-handed alpha
Helix 157	AR4	C	856	865	Right-handed alpha
Helix 158	AR5	C	866	888	Right-handed alpha
Helix 159	AR6	C	889	892	Right-handed 310
Helix 160	AR7	C	893	913	Right-handed alpha
Helix 161	AR8	C	919	934	Right-handed alpha
Helix 162	AR9	C	934	953	Right-handed alpha
Helix 163	AS1	C	954	956	Right-handed 310
Helix 164	AS2	C	964	969	Right-handed alpha
Helix 165	AS3	C	983	987	Right-handed 310
Helix 166	AS4	C	1023	1040	Right-handed alpha
Helix 167	AS5	C	1040	1049	Right-handed alpha
Helix 168	AS6	C	1054	1075	Right-handed alpha
Helix 169	AS7	C	1081	1083	Right-handed 310
Helix 170	AS8	C	1084	1097	Right-handed alpha
Helix 171	AS9	C	1114	1143	Right-handed alpha
Helix 172	AT1	C	1143	1163	Right-handed alpha
Helix 173	AT2	C	1258	1262	Right-handed 310
Helix 174	AT3	C	1410	1419	Right-handed alpha
Helix 175	AT4	C	1454	1464	Right-handed alpha
Helix 176	AT5	C	1485	1496	Right-handed alpha
Helix 177	AT6	C	1497	1499	Right-handed 310
Helix 178	AT7	D	114	118	Right-handed 310
Helix 179	AT8	D	150	161	Right-handed alpha
Helix 180	AT9	D	183	200	Right-handed alpha
Helix 181	AU1	D	213	227	Right-handed alpha
Helix 182	AU2	D	245	247	Right-handed 310
Helix 183	AU3	D	298	312	Right-handed alpha
Helix 184	AU4	D	315	319	Right-handed 310
Helix 185	AU5	D	333	347	Right-handed alpha
Helix 186	AU6	D	359	365	Right-handed alpha
Helix 187	AU7	D	375	382	Right-handed alpha
Helix 188	AU8	D	395	400	Right-handed alpha
Helix 189	AU9	D	400	412	Right-handed alpha
Helix 190	AV1	D	429	442	Right-handed alpha
Helix 191	AV2	D	451	462	Right-handed alpha
Helix 192	AV3	D	464	473	Right-handed alpha
Helix 193	AV4	D	480	483	Right-handed 310
Helix 194	AV5	D	484	495	Right-handed alpha
Helix 195	AV6	D	496	507	Right-handed alpha
Helix 196	AV7	D	515	525	Right-handed alpha
Helix 197	AV8	D	530	543	Right-handed alpha
Helix 198	AV9	D	557	567	Right-handed alpha
Helix 199	AW1	D	580	584	Right-handed 310
Helix 200	AW2	D	594	598	Right-handed 310
Helix 201	AW3	D	620	631	Right-handed alpha
Helix 202	AW4	D	635	643	Right-handed alpha
Helix 203	AW5	D	649	666	Right-handed alpha
Helix 204	AW6	D	671	696	Right-handed alpha
Helix 205	AW7	D	697	705	Right-handed alpha
Helix 206	AW8	D	714	717	Right-handed 310
Helix 207	AW9	D	718	724	Right-handed alpha
Helix 208	AX1	D	728	732	Right-handed 310
Helix 209	AX2	D	733	744	Right-handed alpha
Helix 210	AX3	D	752	762	Right-handed alpha
Helix 211	AX4	D	763	768	Right-handed 310
Helix 212	AX5	D	773	778	Right-handed alpha
Helix 213	AX6	D	783	793	Right-handed alpha
Helix 214	AX7	D	794	819	Right-handed alpha
Helix 215	AX8	D	826	850	Right-handed alpha
Helix 216	AX9	D	856	865	Right-handed alpha
Helix 217	AY1	D	866	888	Right-handed alpha
Helix 218	AY2	D	889	892	Right-handed 310
Helix 219	AY3	D	893	913	Right-handed alpha
Helix 220	AY4	D	919	934	Right-handed alpha
Helix 221	AY5	D	934	953	Right-handed alpha
Helix 222	AY6	D	954	956	Right-handed 310
Helix 223	AY7	D	964	969	Right-handed alpha
Helix 224	AY8	D	983	987	Right-handed 310
Helix 225	AY9	D	1023	1040	Right-handed alpha
Helix 226	AZ1	D	1040	1049	Right-handed alpha
Helix 227	AZ2	D	1054	1075	Right-handed alpha
Helix 228	AZ3	D	1081	1083	Right-handed 310
Helix 229	AZ4	D	1084	1097	Right-handed alpha
Helix 230	AZ5	D	1114	1143	Right-handed alpha
Helix 231	AZ6	D	1143	1163	Right-handed alpha
Helix 232	AZ7	D	1258	1262	Right-handed 310
Helix 233	AZ8	D	1410	1419	Right-handed alpha
Helix 234	AZ9	D	1454	1464	Right-handed alpha
Helix 235	BA1	D	1485	1496	Right-handed alpha
Helix 236	BA2	D	1497	1499	Right-handed 310

There are 20 sheets in PDB entry 8E6S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	70	first strand
Strand 2	A	121	123	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	127	130	first strand
Strand 2	A	140	146	anti-parallel
Strand 3	A	283	288	parallel
Strand 4	A	238	243	parallel
Strand 5	A	205	208	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	175	first strand
Strand 2	A	327	330	parallel
Strand 3	A	350	353	parallel
Strand 4	A	416	419	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1319	1320	first strand
Strand 2	A	1323	1324	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1347	1349	first strand
Strand 2	A	1442	1444	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	70	first strand
Strand 2	B	121	123	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	130	first strand
Strand 2	B	140	146	anti-parallel
Strand 3	B	283	288	parallel
Strand 4	B	238	243	parallel
Strand 5	B	205	208	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	172	175	first strand
Strand 2	B	327	330	parallel
Strand 3	B	350	353	parallel
Strand 4	B	416	419	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1319	1320	first strand
Strand 2	B	1323	1324	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1347	1349	first strand
Strand 2	B	1442	1444	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	70	first strand
Strand 2	C	121	123	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	127	130	first strand
Strand 2	C	140	146	anti-parallel
Strand 3	C	283	288	parallel
Strand 4	C	238	243	parallel
Strand 5	C	205	208	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	175	first strand
Strand 2	C	327	330	parallel
Strand 3	C	350	353	parallel
Strand 4	C	416	419	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1319	1320	first strand
Strand 2	C	1323	1324	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1347	1349	first strand
Strand 2	C	1442	1444	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	68	70	first strand
Strand 2	D	121	123	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	127	130	first strand
Strand 2	D	140	146	anti-parallel
Strand 3	D	283	288	parallel
Strand 4	D	238	243	parallel
Strand 5	D	205	208	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	172	175	first strand
Strand 2	D	327	330	parallel
Strand 3	D	350	353	parallel
Strand 4	D	416	419	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1319	1320	first strand
Strand 2	D	1323	1324	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1347	1349	first strand
Strand 2	D	1442	1444	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8E6S

Analysis of interatomic Contacts of Structural Units in PDB entry:
8E6S