Analysis of interatomic Contacts of Structural Units in PDB entry:
8E6T

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8E6T entry

There are 4 chains in PDB entry 8E6T (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 56	TYR 1503
B	GLN 56	TYR 1503
C	GLN 56	TYR 1503
D	GLN 56	TYR 1503

There are212 helices in PDB entry 8E6T. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	150	160	Right-handed alpha
Helix 2	AA2	A	183	200	Right-handed alpha
Helix 3	AA3	A	213	229	Right-handed alpha
Helix 4	AA4	A	232	236	Right-handed 310
Helix 5	AA5	A	249	253	Right-handed 310
Helix 6	AA6	A	297	312	Right-handed alpha
Helix 7	AA7	A	335	345	Right-handed alpha
Helix 8	AA8	A	359	366	Right-handed alpha
Helix 9	AA9	A	375	384	Right-handed alpha
Helix 10	AB1	A	385	386	Right-handed 310
Helix 11	AB2	A	387	391	Right-handed 310
Helix 12	AB3	A	397	412	Right-handed alpha
Helix 13	AB4	A	429	443	Right-handed alpha
Helix 14	AB5	A	449	462	Right-handed alpha
Helix 15	AB6	A	464	471	Right-handed alpha
Helix 16	AB7	A	480	483	Right-handed 310
Helix 17	AB8	A	484	494	Right-handed alpha
Helix 18	AB9	A	496	507	Right-handed alpha
Helix 19	AC1	A	515	525	Right-handed alpha
Helix 20	AC2	A	530	543	Right-handed alpha
Helix 21	AC3	A	557	570	Right-handed alpha
Helix 22	AC4	A	622	632	Right-handed alpha
Helix 23	AC5	A	634	643	Right-handed alpha
Helix 24	AC6	A	649	663	Right-handed alpha
Helix 25	AC7	A	670	697	Right-handed alpha
Helix 26	AC8	A	698	702	Right-handed 310
Helix 27	AC9	A	716	724	Right-handed alpha
Helix 28	AD1	A	733	745	Right-handed alpha
Helix 29	AD2	A	753	762	Right-handed alpha
Helix 30	AD3	A	783	794	Right-handed alpha
Helix 31	AD4	A	794	819	Right-handed alpha
Helix 32	AD5	A	828	849	Right-handed alpha
Helix 33	AD6	A	855	865	Right-handed alpha
Helix 34	AD7	A	866	880	Right-handed alpha
Helix 35	AD8	A	882	888	Right-handed alpha
Helix 36	AD9	A	891	911	Right-handed alpha
Helix 37	AE1	A	912	916	Right-handed 310
Helix 38	AE2	A	920	957	Right-handed alpha
Helix 39	AE3	A	962	980	Right-handed alpha
Helix 40	AE4	A	1033	1037	Right-handed alpha
Helix 41	AE5	A	1039	1053	Right-handed alpha
Helix 42	AE6	A	1055	1077	Right-handed alpha
Helix 43	AE7	A	1085	1090	Right-handed alpha
Helix 44	AE8	A	1093	1098	Right-handed alpha
Helix 45	AE9	A	1114	1141	Right-handed alpha
Helix 46	AF1	A	1143	1165	Right-handed alpha
Helix 47	AF2	A	1240	1244	Right-handed 310
Helix 48	AF3	A	1281	1285	Right-handed 310
Helix 49	AF4	A	1397	1403	Right-handed alpha
Helix 50	AF5	A	1410	1418	Right-handed alpha
Helix 51	AF6	A	1455	1463	Right-handed alpha
Helix 52	AF7	A	1465	1469	Right-handed 310
Helix 53	AF8	A	1488	1496	Right-handed alpha
Helix 54	AF9	B	150	160	Right-handed alpha
Helix 55	AG1	B	183	200	Right-handed alpha
Helix 56	AG2	B	213	229	Right-handed alpha
Helix 57	AG3	B	232	236	Right-handed 310
Helix 58	AG4	B	249	253	Right-handed 310
Helix 59	AG5	B	297	312	Right-handed alpha
Helix 60	AG6	B	335	345	Right-handed alpha
Helix 61	AG7	B	359	366	Right-handed alpha
Helix 62	AG8	B	375	384	Right-handed alpha
Helix 63	AG9	B	385	386	Right-handed 310
Helix 64	AH1	B	387	391	Right-handed 310
Helix 65	AH2	B	397	412	Right-handed alpha
Helix 66	AH3	B	429	443	Right-handed alpha
Helix 67	AH4	B	449	462	Right-handed alpha
Helix 68	AH5	B	464	471	Right-handed alpha
Helix 69	AH6	B	480	483	Right-handed 310
Helix 70	AH7	B	484	494	Right-handed alpha
Helix 71	AH8	B	496	507	Right-handed alpha
Helix 72	AH9	B	515	525	Right-handed alpha
Helix 73	AI1	B	530	543	Right-handed alpha
Helix 74	AI2	B	557	570	Right-handed alpha
Helix 75	AI3	B	622	632	Right-handed alpha
Helix 76	AI4	B	634	643	Right-handed alpha
Helix 77	AI5	B	649	663	Right-handed alpha
Helix 78	AI6	B	670	697	Right-handed alpha
Helix 79	AI7	B	698	702	Right-handed 310
Helix 80	AI8	B	716	724	Right-handed alpha
Helix 81	AI9	B	733	745	Right-handed alpha
Helix 82	AJ1	B	753	762	Right-handed alpha
Helix 83	AJ2	B	783	794	Right-handed alpha
Helix 84	AJ3	B	794	819	Right-handed alpha
Helix 85	AJ4	B	828	849	Right-handed alpha
Helix 86	AJ5	B	855	865	Right-handed alpha
Helix 87	AJ6	B	866	880	Right-handed alpha
Helix 88	AJ7	B	882	888	Right-handed alpha
Helix 89	AJ8	B	891	911	Right-handed alpha
Helix 90	AJ9	B	912	916	Right-handed 310
Helix 91	AK1	B	920	957	Right-handed alpha
Helix 92	AK2	B	962	980	Right-handed alpha
Helix 93	AK3	B	1033	1037	Right-handed alpha
Helix 94	AK4	B	1039	1053	Right-handed alpha
Helix 95	AK5	B	1055	1077	Right-handed alpha
Helix 96	AK6	B	1085	1090	Right-handed alpha
Helix 97	AK7	B	1093	1098	Right-handed alpha
Helix 98	AK8	B	1114	1141	Right-handed alpha
Helix 99	AK9	B	1143	1165	Right-handed alpha
Helix 100	AL1	B	1240	1244	Right-handed 310
Helix 101	AL2	B	1281	1285	Right-handed 310
Helix 102	AL3	B	1397	1403	Right-handed alpha
Helix 103	AL4	B	1410	1418	Right-handed alpha
Helix 104	AL5	B	1455	1463	Right-handed alpha
Helix 105	AL6	B	1465	1469	Right-handed 310
Helix 106	AL7	B	1488	1496	Right-handed alpha
Helix 107	AL8	C	150	160	Right-handed alpha
Helix 108	AL9	C	183	200	Right-handed alpha
Helix 109	AM1	C	213	229	Right-handed alpha
Helix 110	AM2	C	232	236	Right-handed 310
Helix 111	AM3	C	249	253	Right-handed 310
Helix 112	AM4	C	297	312	Right-handed alpha
Helix 113	AM5	C	335	345	Right-handed alpha
Helix 114	AM6	C	359	366	Right-handed alpha
Helix 115	AM7	C	375	384	Right-handed alpha
Helix 116	AM8	C	385	386	Right-handed 310
Helix 117	AM9	C	387	391	Right-handed 310
Helix 118	AN1	C	397	412	Right-handed alpha
Helix 119	AN2	C	429	443	Right-handed alpha
Helix 120	AN3	C	449	462	Right-handed alpha
Helix 121	AN4	C	464	471	Right-handed alpha
Helix 122	AN5	C	480	483	Right-handed 310
Helix 123	AN6	C	484	494	Right-handed alpha
Helix 124	AN7	C	496	507	Right-handed alpha
Helix 125	AN8	C	515	525	Right-handed alpha
Helix 126	AN9	C	530	543	Right-handed alpha
Helix 127	AO1	C	557	570	Right-handed alpha
Helix 128	AO2	C	622	632	Right-handed alpha
Helix 129	AO3	C	634	643	Right-handed alpha
Helix 130	AO4	C	649	663	Right-handed alpha
Helix 131	AO5	C	670	697	Right-handed alpha
Helix 132	AO6	C	698	702	Right-handed 310
Helix 133	AO7	C	716	724	Right-handed alpha
Helix 134	AO8	C	733	745	Right-handed alpha
Helix 135	AO9	C	753	762	Right-handed alpha
Helix 136	AP1	C	783	794	Right-handed alpha
Helix 137	AP2	C	794	819	Right-handed alpha
Helix 138	AP3	C	828	849	Right-handed alpha
Helix 139	AP4	C	855	865	Right-handed alpha
Helix 140	AP5	C	866	880	Right-handed alpha
Helix 141	AP6	C	882	888	Right-handed alpha
Helix 142	AP7	C	891	911	Right-handed alpha
Helix 143	AP8	C	912	916	Right-handed 310
Helix 144	AP9	C	920	957	Right-handed alpha
Helix 145	AQ1	C	962	980	Right-handed alpha
Helix 146	AQ2	C	1033	1037	Right-handed alpha
Helix 147	AQ3	C	1039	1053	Right-handed alpha
Helix 148	AQ4	C	1055	1077	Right-handed alpha
Helix 149	AQ5	C	1085	1090	Right-handed alpha
Helix 150	AQ6	C	1093	1098	Right-handed alpha
Helix 151	AQ7	C	1114	1141	Right-handed alpha
Helix 152	AQ8	C	1143	1165	Right-handed alpha
Helix 153	AQ9	C	1240	1244	Right-handed 310
Helix 154	AR1	C	1281	1285	Right-handed 310
Helix 155	AR2	C	1397	1403	Right-handed alpha
Helix 156	AR3	C	1410	1418	Right-handed alpha
Helix 157	AR4	C	1455	1463	Right-handed alpha
Helix 158	AR5	C	1465	1469	Right-handed 310
Helix 159	AR6	C	1488	1496	Right-handed alpha
Helix 160	AR7	D	150	160	Right-handed alpha
Helix 161	AR8	D	183	200	Right-handed alpha
Helix 162	AR9	D	213	229	Right-handed alpha
Helix 163	AS1	D	232	236	Right-handed 310
Helix 164	AS2	D	249	253	Right-handed 310
Helix 165	AS3	D	297	312	Right-handed alpha
Helix 166	AS4	D	335	345	Right-handed alpha
Helix 167	AS5	D	359	366	Right-handed alpha
Helix 168	AS6	D	375	384	Right-handed alpha
Helix 169	AS7	D	385	386	Right-handed 310
Helix 170	AS8	D	387	391	Right-handed 310
Helix 171	AS9	D	397	412	Right-handed alpha
Helix 172	AT1	D	429	443	Right-handed alpha
Helix 173	AT2	D	449	462	Right-handed alpha
Helix 174	AT3	D	464	471	Right-handed alpha
Helix 175	AT4	D	480	483	Right-handed 310
Helix 176	AT5	D	484	494	Right-handed alpha
Helix 177	AT6	D	496	507	Right-handed alpha
Helix 178	AT7	D	515	525	Right-handed alpha
Helix 179	AT8	D	530	543	Right-handed alpha
Helix 180	AT9	D	557	570	Right-handed alpha
Helix 181	AU1	D	622	632	Right-handed alpha
Helix 182	AU2	D	634	643	Right-handed alpha
Helix 183	AU3	D	649	663	Right-handed alpha
Helix 184	AU4	D	670	697	Right-handed alpha
Helix 185	AU5	D	698	702	Right-handed 310
Helix 186	AU6	D	716	724	Right-handed alpha
Helix 187	AU7	D	733	745	Right-handed alpha
Helix 188	AU8	D	753	762	Right-handed alpha
Helix 189	AU9	D	783	794	Right-handed alpha
Helix 190	AV1	D	794	819	Right-handed alpha
Helix 191	AV2	D	828	849	Right-handed alpha
Helix 192	AV3	D	855	865	Right-handed alpha
Helix 193	AV4	D	866	880	Right-handed alpha
Helix 194	AV5	D	882	888	Right-handed alpha
Helix 195	AV6	D	891	911	Right-handed alpha
Helix 196	AV7	D	912	916	Right-handed 310
Helix 197	AV8	D	920	957	Right-handed alpha
Helix 198	AV9	D	962	980	Right-handed alpha
Helix 199	AW1	D	1033	1037	Right-handed alpha
Helix 200	AW2	D	1039	1053	Right-handed alpha
Helix 201	AW3	D	1055	1077	Right-handed alpha
Helix 202	AW4	D	1085	1090	Right-handed alpha
Helix 203	AW5	D	1093	1098	Right-handed alpha
Helix 204	AW6	D	1114	1141	Right-handed alpha
Helix 205	AW7	D	1143	1165	Right-handed alpha
Helix 206	AW8	D	1240	1244	Right-handed 310
Helix 207	AW9	D	1281	1285	Right-handed 310
Helix 208	AX1	D	1397	1403	Right-handed alpha
Helix 209	AX2	D	1410	1418	Right-handed alpha
Helix 210	AX3	D	1455	1463	Right-handed alpha
Helix 211	AX4	D	1465	1469	Right-handed 310
Helix 212	AX5	D	1488	1496	Right-handed alpha

There are 32 sheets in PDB entry 8E6T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	71	first strand
Strand 2	A	120	123	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	208	first strand
Strand 2	A	239	243	parallel
Strand 3	A	283	287	parallel
Strand 4	A	140	145	parallel
Strand 5	A	127	131	anti-parallel
Strand 6	A	259	263	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	170	173	first strand
Strand 2	A	325	329	parallel
Strand 3	A	350	352	parallel
Strand 4	A	417	418	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	313	316	first strand
Strand 2	A	319	322	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1275	1276	first strand
Strand 2	A	1334	1335	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1319	1320	first strand
Strand 2	A	1323	1324	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1345	1346	first strand
Strand 2	A	1440	1449	parallel
Strand 3	A	1422	1429	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1345	1346	first strand
Strand 2	A	1440	1449	parallel
Strand 3	A	1349	1355	parallel
Strand 4	A	1372	1377	anti-parallel
Strand 5	A	1473	1477	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	71	first strand
Strand 2	B	120	123	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	207	208	first strand
Strand 2	B	239	243	parallel
Strand 3	B	283	287	parallel
Strand 4	B	140	145	parallel
Strand 5	B	127	131	anti-parallel
Strand 6	B	259	263	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	170	173	first strand
Strand 2	B	325	329	parallel
Strand 3	B	350	352	parallel
Strand 4	B	417	418	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	313	316	first strand
Strand 2	B	319	322	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1275	1276	first strand
Strand 2	B	1334	1335	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1319	1320	first strand
Strand 2	B	1323	1324	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1345	1346	first strand
Strand 2	B	1440	1449	parallel
Strand 3	B	1422	1429	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1345	1346	first strand
Strand 2	B	1440	1449	parallel
Strand 3	B	1349	1355	parallel
Strand 4	B	1372	1377	anti-parallel
Strand 5	B	1473	1477	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	71	first strand
Strand 2	C	120	123	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	207	208	first strand
Strand 2	C	239	243	parallel
Strand 3	C	283	287	parallel
Strand 4	C	140	145	parallel
Strand 5	C	127	131	anti-parallel
Strand 6	C	259	263	parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	170	173	first strand
Strand 2	C	325	329	parallel
Strand 3	C	350	352	parallel
Strand 4	C	417	418	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	313	316	first strand
Strand 2	C	319	322	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1275	1276	first strand
Strand 2	C	1334	1335	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1319	1320	first strand
Strand 2	C	1323	1324	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1345	1346	first strand
Strand 2	C	1440	1449	parallel
Strand 3	C	1422	1429	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1345	1346	first strand
Strand 2	C	1440	1449	parallel
Strand 3	C	1349	1355	parallel
Strand 4	C	1372	1377	anti-parallel
Strand 5	C	1473	1477	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	68	71	first strand
Strand 2	D	120	123	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	207	208	first strand
Strand 2	D	239	243	parallel
Strand 3	D	283	287	parallel
Strand 4	D	140	145	parallel
Strand 5	D	127	131	anti-parallel
Strand 6	D	259	263	parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	170	173	first strand
Strand 2	D	325	329	parallel
Strand 3	D	350	352	parallel
Strand 4	D	417	418	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	313	316	first strand
Strand 2	D	319	322	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1275	1276	first strand
Strand 2	D	1334	1335	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1319	1320	first strand
Strand 2	D	1323	1324	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1345	1346	first strand
Strand 2	D	1440	1449	parallel
Strand 3	D	1422	1429	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1345	1346	first strand
Strand 2	D	1440	1449	parallel
Strand 3	D	1349	1355	parallel
Strand 4	D	1372	1377	anti-parallel
Strand 5	D	1473	1477	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8E6T

Analysis of interatomic Contacts of Structural Units in PDB entry:
8E6T