Analysis of interatomic Contacts of Structural Units in PDB entry:
8E6U

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8E6U entry

There are 4 chains in PDB entry 8E6U (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 67	TYR 1503
B	ILE 67	TYR 1503
C	ILE 67	TYR 1503
D	ILE 67	TYR 1503

There are220 helices in PDB entry 8E6U. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	150	161	Right-handed alpha
Helix 2	AA2	A	183	202	Right-handed alpha
Helix 3	AA3	A	213	227	Right-handed alpha
Helix 4	AA4	A	298	312	Right-handed alpha
Helix 5	AA5	A	333	346	Right-handed alpha
Helix 6	AA6	A	357	366	Right-handed alpha
Helix 7	AA7	A	375	380	Right-handed alpha
Helix 8	AA8	A	381	383	Right-handed 310
Helix 9	AA9	A	395	412	Right-handed alpha
Helix 10	AB1	A	420	425	Right-handed alpha
Helix 11	AB2	A	429	444	Right-handed alpha
Helix 12	AB3	A	449	463	Right-handed alpha
Helix 13	AB4	A	464	471	Right-handed alpha
Helix 14	AB5	A	480	483	Right-handed 310
Helix 15	AB6	A	484	495	Right-handed alpha
Helix 16	AB7	A	496	507	Right-handed alpha
Helix 17	AB8	A	509	514	Right-handed alpha
Helix 18	AB9	A	515	524	Right-handed alpha
Helix 19	AC1	A	530	543	Right-handed alpha
Helix 20	AC2	A	557	569	Right-handed alpha
Helix 21	AC3	A	620	632	Right-handed alpha
Helix 22	AC4	A	634	644	Right-handed alpha
Helix 23	AC5	A	647	664	Right-handed alpha
Helix 24	AC6	A	668	696	Right-handed alpha
Helix 25	AC7	A	697	707	Right-handed alpha
Helix 26	AC8	A	709	713	Right-handed 310
Helix 27	AC9	A	716	725	Right-handed alpha
Helix 28	AD1	A	726	731	Right-handed alpha
Helix 29	AD2	A	733	743	Right-handed alpha
Helix 30	AD3	A	752	762	Right-handed alpha
Helix 31	AD4	A	762	767	Right-handed alpha
Helix 32	AD5	A	783	794	Right-handed alpha
Helix 33	AD6	A	794	819	Right-handed alpha
Helix 34	AD7	A	829	850	Right-handed alpha
Helix 35	AD8	A	859	866	Right-handed alpha
Helix 36	AD9	A	866	888	Right-handed alpha
Helix 37	AE1	A	891	899	Right-handed alpha
Helix 38	AE2	A	899	914	Right-handed alpha
Helix 39	AE3	A	920	930	Right-handed alpha
Helix 40	AE4	A	930	956	Right-handed alpha
Helix 41	AE5	A	965	980	Right-handed alpha
Helix 42	AE6	A	983	988	Right-handed alpha
Helix 43	AE7	A	1021	1038	Right-handed alpha
Helix 44	AE8	A	1038	1055	Right-handed alpha
Helix 45	AE9	A	1055	1076	Right-handed alpha
Helix 46	AF1	A	1084	1099	Right-handed alpha
Helix 47	AF2	A	1114	1143	Right-handed alpha
Helix 48	AF3	A	1143	1160	Right-handed alpha
Helix 49	AF4	A	1161	1163	Right-handed 310
Helix 50	AF5	A	1258	1262	Right-handed 310
Helix 51	AF6	A	1263	1267	Right-handed 310
Helix 52	AF7	A	1402	1409	Right-handed alpha
Helix 53	AF8	A	1413	1420	Right-handed alpha
Helix 54	AF9	A	1453	1463	Right-handed alpha
Helix 55	AG1	A	1485	1496	Right-handed alpha
Helix 56	AG2	B	150	161	Right-handed alpha
Helix 57	AG3	B	183	202	Right-handed alpha
Helix 58	AG4	B	213	227	Right-handed alpha
Helix 59	AG5	B	298	312	Right-handed alpha
Helix 60	AG6	B	333	346	Right-handed alpha
Helix 61	AG7	B	357	366	Right-handed alpha
Helix 62	AG8	B	375	380	Right-handed alpha
Helix 63	AG9	B	381	383	Right-handed 310
Helix 64	AH1	B	395	412	Right-handed alpha
Helix 65	AH2	B	420	425	Right-handed alpha
Helix 66	AH3	B	429	444	Right-handed alpha
Helix 67	AH4	B	449	463	Right-handed alpha
Helix 68	AH5	B	464	471	Right-handed alpha
Helix 69	AH6	B	480	483	Right-handed 310
Helix 70	AH7	B	484	495	Right-handed alpha
Helix 71	AH8	B	496	507	Right-handed alpha
Helix 72	AH9	B	509	514	Right-handed alpha
Helix 73	AI1	B	515	524	Right-handed alpha
Helix 74	AI2	B	530	543	Right-handed alpha
Helix 75	AI3	B	557	569	Right-handed alpha
Helix 76	AI4	B	620	632	Right-handed alpha
Helix 77	AI5	B	634	644	Right-handed alpha
Helix 78	AI6	B	647	664	Right-handed alpha
Helix 79	AI7	B	668	696	Right-handed alpha
Helix 80	AI8	B	697	707	Right-handed alpha
Helix 81	AI9	B	709	713	Right-handed 310
Helix 82	AJ1	B	716	725	Right-handed alpha
Helix 83	AJ2	B	726	731	Right-handed alpha
Helix 84	AJ3	B	733	743	Right-handed alpha
Helix 85	AJ4	B	752	762	Right-handed alpha
Helix 86	AJ5	B	762	767	Right-handed alpha
Helix 87	AJ6	B	783	794	Right-handed alpha
Helix 88	AJ7	B	794	819	Right-handed alpha
Helix 89	AJ8	B	829	850	Right-handed alpha
Helix 90	AJ9	B	859	866	Right-handed alpha
Helix 91	AK1	B	866	888	Right-handed alpha
Helix 92	AK2	B	891	899	Right-handed alpha
Helix 93	AK3	B	899	914	Right-handed alpha
Helix 94	AK4	B	920	930	Right-handed alpha
Helix 95	AK5	B	930	956	Right-handed alpha
Helix 96	AK6	B	965	980	Right-handed alpha
Helix 97	AK7	B	983	988	Right-handed alpha
Helix 98	AK8	B	1021	1038	Right-handed alpha
Helix 99	AK9	B	1038	1055	Right-handed alpha
Helix 100	AL1	B	1055	1076	Right-handed alpha
Helix 101	AL2	B	1084	1099	Right-handed alpha
Helix 102	AL3	B	1114	1143	Right-handed alpha
Helix 103	AL4	B	1143	1160	Right-handed alpha
Helix 104	AL5	B	1161	1163	Right-handed 310
Helix 105	AL6	B	1258	1262	Right-handed 310
Helix 106	AL7	B	1263	1267	Right-handed 310
Helix 107	AL8	B	1402	1409	Right-handed alpha
Helix 108	AL9	B	1413	1420	Right-handed alpha
Helix 109	AM1	B	1453	1463	Right-handed alpha
Helix 110	AM2	B	1485	1496	Right-handed alpha
Helix 111	AM3	C	150	161	Right-handed alpha
Helix 112	AM4	C	183	202	Right-handed alpha
Helix 113	AM5	C	213	227	Right-handed alpha
Helix 114	AM6	C	298	312	Right-handed alpha
Helix 115	AM7	C	333	346	Right-handed alpha
Helix 116	AM8	C	357	366	Right-handed alpha
Helix 117	AM9	C	375	380	Right-handed alpha
Helix 118	AN1	C	381	383	Right-handed 310
Helix 119	AN2	C	395	412	Right-handed alpha
Helix 120	AN3	C	420	425	Right-handed alpha
Helix 121	AN4	C	429	444	Right-handed alpha
Helix 122	AN5	C	449	463	Right-handed alpha
Helix 123	AN6	C	464	471	Right-handed alpha
Helix 124	AN7	C	480	483	Right-handed 310
Helix 125	AN8	C	484	495	Right-handed alpha
Helix 126	AN9	C	496	507	Right-handed alpha
Helix 127	AO1	C	509	514	Right-handed alpha
Helix 128	AO2	C	515	524	Right-handed alpha
Helix 129	AO3	C	530	543	Right-handed alpha
Helix 130	AO4	C	557	569	Right-handed alpha
Helix 131	AO5	C	620	632	Right-handed alpha
Helix 132	AO6	C	634	644	Right-handed alpha
Helix 133	AO7	C	647	664	Right-handed alpha
Helix 134	AO8	C	668	696	Right-handed alpha
Helix 135	AO9	C	697	707	Right-handed alpha
Helix 136	AP1	C	709	713	Right-handed 310
Helix 137	AP2	C	716	725	Right-handed alpha
Helix 138	AP3	C	726	731	Right-handed alpha
Helix 139	AP4	C	733	743	Right-handed alpha
Helix 140	AP5	C	752	762	Right-handed alpha
Helix 141	AP6	C	762	767	Right-handed alpha
Helix 142	AP7	C	783	794	Right-handed alpha
Helix 143	AP8	C	794	819	Right-handed alpha
Helix 144	AP9	C	829	850	Right-handed alpha
Helix 145	AQ1	C	859	866	Right-handed alpha
Helix 146	AQ2	C	866	888	Right-handed alpha
Helix 147	AQ3	C	891	899	Right-handed alpha
Helix 148	AQ4	C	899	914	Right-handed alpha
Helix 149	AQ5	C	920	930	Right-handed alpha
Helix 150	AQ6	C	930	956	Right-handed alpha
Helix 151	AQ7	C	965	980	Right-handed alpha
Helix 152	AQ8	C	983	988	Right-handed alpha
Helix 153	AQ9	C	1021	1038	Right-handed alpha
Helix 154	AR1	C	1038	1055	Right-handed alpha
Helix 155	AR2	C	1055	1076	Right-handed alpha
Helix 156	AR3	C	1084	1099	Right-handed alpha
Helix 157	AR4	C	1114	1143	Right-handed alpha
Helix 158	AR5	C	1143	1160	Right-handed alpha
Helix 159	AR6	C	1161	1163	Right-handed 310
Helix 160	AR7	C	1258	1262	Right-handed 310
Helix 161	AR8	C	1263	1267	Right-handed 310
Helix 162	AR9	C	1402	1409	Right-handed alpha
Helix 163	AS1	C	1413	1420	Right-handed alpha
Helix 164	AS2	C	1453	1463	Right-handed alpha
Helix 165	AS3	C	1485	1496	Right-handed alpha
Helix 166	AS4	D	150	161	Right-handed alpha
Helix 167	AS5	D	183	202	Right-handed alpha
Helix 168	AS6	D	213	227	Right-handed alpha
Helix 169	AS7	D	298	312	Right-handed alpha
Helix 170	AS8	D	333	346	Right-handed alpha
Helix 171	AS9	D	357	366	Right-handed alpha
Helix 172	AT1	D	375	380	Right-handed alpha
Helix 173	AT2	D	381	383	Right-handed 310
Helix 174	AT3	D	395	412	Right-handed alpha
Helix 175	AT4	D	420	425	Right-handed alpha
Helix 176	AT5	D	429	444	Right-handed alpha
Helix 177	AT6	D	449	463	Right-handed alpha
Helix 178	AT7	D	464	471	Right-handed alpha
Helix 179	AT8	D	480	483	Right-handed 310
Helix 180	AT9	D	484	495	Right-handed alpha
Helix 181	AU1	D	496	507	Right-handed alpha
Helix 182	AU2	D	509	514	Right-handed alpha
Helix 183	AU3	D	515	524	Right-handed alpha
Helix 184	AU4	D	530	543	Right-handed alpha
Helix 185	AU5	D	557	569	Right-handed alpha
Helix 186	AU6	D	620	632	Right-handed alpha
Helix 187	AU7	D	634	644	Right-handed alpha
Helix 188	AU8	D	647	664	Right-handed alpha
Helix 189	AU9	D	668	696	Right-handed alpha
Helix 190	AV1	D	697	707	Right-handed alpha
Helix 191	AV2	D	709	713	Right-handed 310
Helix 192	AV3	D	716	725	Right-handed alpha
Helix 193	AV4	D	726	731	Right-handed alpha
Helix 194	AV5	D	733	743	Right-handed alpha
Helix 195	AV6	D	752	762	Right-handed alpha
Helix 196	AV7	D	762	767	Right-handed alpha
Helix 197	AV8	D	783	794	Right-handed alpha
Helix 198	AV9	D	794	819	Right-handed alpha
Helix 199	AW1	D	829	850	Right-handed alpha
Helix 200	AW2	D	859	866	Right-handed alpha
Helix 201	AW3	D	866	888	Right-handed alpha
Helix 202	AW4	D	891	899	Right-handed alpha
Helix 203	AW5	D	899	914	Right-handed alpha
Helix 204	AW6	D	920	930	Right-handed alpha
Helix 205	AW7	D	930	956	Right-handed alpha
Helix 206	AW8	D	965	980	Right-handed alpha
Helix 207	AW9	D	983	988	Right-handed alpha
Helix 208	AX1	D	1021	1038	Right-handed alpha
Helix 209	AX2	D	1038	1055	Right-handed alpha
Helix 210	AX3	D	1055	1076	Right-handed alpha
Helix 211	AX4	D	1084	1099	Right-handed alpha
Helix 212	AX5	D	1114	1143	Right-handed alpha
Helix 213	AX6	D	1143	1160	Right-handed alpha
Helix 214	AX7	D	1161	1163	Right-handed 310
Helix 215	AX8	D	1258	1262	Right-handed 310
Helix 216	AX9	D	1263	1267	Right-handed 310
Helix 217	AY1	D	1402	1409	Right-handed alpha
Helix 218	AY2	D	1413	1420	Right-handed alpha
Helix 219	AY3	D	1453	1463	Right-handed alpha
Helix 220	AY4	D	1485	1496	Right-handed alpha

There are 20 sheets in PDB entry 8E6U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	76	first strand
Strand 2	A	120	123	anti-parallel

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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	263	264	first strand
Strand 2	A	127	132	parallel
Strand 3	A	140	146	anti-parallel
Strand 4	A	283	288	parallel
Strand 5	A	237	243	parallel
Strand 6	A	204	207	parallel
Strand 7	A	170	173	parallel
Strand 8	A	325	329	parallel
Strand 9	A	350	353	parallel
Strand 10	A	416	419	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	313	314	first strand
Strand 2	A	321	322	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1346	1348	first strand
Strand 2	A	1441	1446	parallel
Strand 3	A	1422	1428	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1353	1354	first strand
Strand 2	A	1373	1378	anti-parallel
Strand 3	A	1472	1477	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	73	76	first strand
Strand 2	B	120	123	anti-parallel

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There are 10 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	263	264	first strand
Strand 2	B	127	132	parallel
Strand 3	B	140	146	anti-parallel
Strand 4	B	283	288	parallel
Strand 5	B	237	243	parallel
Strand 6	B	204	207	parallel
Strand 7	B	170	173	parallel
Strand 8	B	325	329	parallel
Strand 9	B	350	353	parallel
Strand 10	B	416	419	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	313	314	first strand
Strand 2	B	321	322	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1346	1348	first strand
Strand 2	B	1441	1446	parallel
Strand 3	B	1422	1428	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1353	1354	first strand
Strand 2	B	1373	1378	anti-parallel
Strand 3	B	1472	1477	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	73	76	first strand
Strand 2	C	120	123	anti-parallel

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There are 10 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	263	264	first strand
Strand 2	C	127	132	parallel
Strand 3	C	140	146	anti-parallel
Strand 4	C	283	288	parallel
Strand 5	C	237	243	parallel
Strand 6	C	204	207	parallel
Strand 7	C	170	173	parallel
Strand 8	C	325	329	parallel
Strand 9	C	350	353	parallel
Strand 10	C	416	419	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	313	314	first strand
Strand 2	C	321	322	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1346	1348	first strand
Strand 2	C	1441	1446	parallel
Strand 3	C	1422	1428	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1353	1354	first strand
Strand 2	C	1373	1378	anti-parallel
Strand 3	C	1472	1477	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	73	76	first strand
Strand 2	D	120	123	anti-parallel

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There are 10 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	263	264	first strand
Strand 2	D	127	132	parallel
Strand 3	D	140	146	anti-parallel
Strand 4	D	283	288	parallel
Strand 5	D	237	243	parallel
Strand 6	D	204	207	parallel
Strand 7	D	170	173	parallel
Strand 8	D	325	329	parallel
Strand 9	D	350	353	parallel
Strand 10	D	416	419	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	313	314	first strand
Strand 2	D	321	322	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1346	1348	first strand
Strand 2	D	1441	1446	parallel
Strand 3	D	1422	1428	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1353	1354	first strand
Strand 2	D	1373	1378	anti-parallel
Strand 3	D	1472	1477	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8E6U

Analysis of interatomic Contacts of Structural Units in PDB entry:
8E6U