Analysis of interatomic Contacts of Structural Units in PDB entry:
8E6V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8E6V entry

There is 1 chain in PDB entry 8E6V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 60TYR 1503
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 8E6V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
94 98Right-handed 310
Helix 2
AA2
A
152 160Right-handed alpha
Helix 3
AA3
A
183 200Right-handed alpha
Helix 4
AA4
A
213 228Right-handed alpha
Helix 5
AA5
A
297 312Right-handed alpha
Helix 6
AA6
A
333 347Right-handed alpha
Helix 7
AA7
A
359 365Right-handed alpha
Helix 8
AA8
A
375 383Right-handed alpha
Helix 9
AA9
A
395 412Right-handed alpha
Helix 10
AB1
A
429 443Right-handed alpha
Helix 11
AB2
A
451 462Right-handed alpha
Helix 12
AB3
A
464 473Right-handed alpha
Helix 13
AB4
A
480 483Right-handed 310
Helix 14
AB5
A
484 494Right-handed alpha
Helix 15
AB6
A
496 506Right-handed alpha
Helix 16
AB7
A
1258 1262Right-handed 310
Helix 17
AB8
A
1410 1419Right-handed alpha
Helix 18
AB9
A
1455 1465Right-handed alpha
Helix 19
AC1
A
1485 1496Right-handed alpha
Helix 20
AC2
A
1497 1499Right-handed 310
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There are 5 sheets in PDB entry 8E6V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 72first strand
Strand 2
A
119 123anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 264first strand
Strand 2
A
127 132parallel
Strand 3
A
140 146anti-parallel
Strand 4
A
283 288parallel
Strand 5
A
237 243parallel
Strand 6
A
204 207parallel
Strand 7
A
170 175parallel
Strand 8
A
327 330parallel
Strand 9
A
350 353parallel
Strand 10
A
416 419parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1319 1320first strand
Strand 2
A
1323 1324anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1343 1347first strand
Strand 2
A
1438 1449parallel
Strand 3
A
1351 1355parallel
Strand 4
A
1372 1378anti-parallel
Strand 5
A
1422 1428first strand
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1385 1386first strand
Strand 2
A
1372 1378anti-parallel
Strand 3
A
1351 1355anti-parallel
Strand 4
A
1438 1449parallel
Strand 5
A
1472 1477first strand
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