Analysis of interatomic Contacts of Structural Units in PDB entry:
8E7C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8E7C entry

There are 2 chains in PDB entry 8E7C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1ILE 304
B
 ALA 1ILE 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 8E7C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 15Right-handed alpha
Helix 2
AA2
A
41 44Right-handed 310
Helix 3
AA3
A
50 57Right-handed alpha
Helix 4
AA4
A
59 61Right-handed 310
Helix 5
AA5
A
199 214Right-handed alpha
Helix 6
AA6
A
227 236Right-handed alpha
Helix 7
AA7
A
246 260Right-handed alpha
Helix 8
AA8
A
263 274Right-handed alpha
Helix 9
AA9
A
294 300Right-handed alpha
Helix 10
AB1
B
10 15Right-handed alpha
Helix 11
AB2
B
41 44Right-handed 310
Helix 12
AB3
B
50 57Right-handed alpha
Helix 13
AB4
B
199 214Right-handed alpha
Helix 14
AB5
B
227 238Right-handed alpha
Helix 15
AB6
B
248 261Right-handed alpha
Helix 16
AB7
B
263 276Right-handed alpha
Helix 17
AB8
B
294 301Right-handed alpha
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There are 6 sheets in PDB entry 8E7C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 74first strand
Strand 2
A
63 67anti-parallel
Strand 3
A
17 22anti-parallel
Strand 4
A
25 32anti-parallel
Strand 5
A
35 39anti-parallel
Strand 6
A
85 90anti-parallel
Strand 7
A
76 82anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 102first strand
Strand 2
A
155 166parallel
Strand 3
A
147 151anti-parallel
Strand 4
A
110 117anti-parallel
Strand 5
A
120 128anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 102first strand
Strand 2
A
155 166parallel
Strand 3
A
170 174anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 74first strand
Strand 2
B
64 67anti-parallel
Strand 3
B
17 22anti-parallel
Strand 4
B
25 32anti-parallel
Strand 5
B
35 39anti-parallel
Strand 6
B
85 90anti-parallel
Strand 7
B
76 82anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 102first strand
Strand 2
B
155 165parallel
Strand 3
B
147 151anti-parallel
Strand 4
B
110 117anti-parallel
Strand 5
B
120 128anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 102first strand
Strand 2
B
155 165parallel
Strand 3
B
171 174anti-parallel
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