Analysis of interatomic Contacts of Structural Units in PDB entry:
8E7I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8E7I entry

There are 5 chains in PDB entry 8E7I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 12THR 123
B
 LEU 12THR 123
C
 LEU 12THR 123
D
 LEU 12THR 123
E
 LEU 12THR 123
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 8E7I

There are 7 sheets in PDB entry 8E7I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
13 32first strand
Strand 2
B
13 32parallel
Strand 3
A
13 32parallel
Strand 4
C
13 32parallel
Strand 5
E
13 32parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
59 62first strand
Strand 2
B
59 62parallel
Strand 3
A
59 62parallel
Strand 4
C
59 62parallel
Strand 5
E
59 62parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
69 73first strand
Strand 2
B
69 73parallel
Strand 3
A
69 73parallel
Strand 4
C
69 73parallel
Strand 5
E
69 73parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
76 80first strand
Strand 2
B
76 80parallel
Strand 3
A
76 80parallel
Strand 4
C
76 80parallel
Strand 5
E
76 80parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
92 95first strand
Strand 2
B
92 95parallel
Strand 3
A
92 95parallel
Strand 4
C
92 95parallel
Strand 5
E
92 95parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
103 110first strand
Strand 2
B
103 110parallel
Strand 3
A
103 110parallel
Strand 4
C
103 110parallel
Strand 5
E
103 110parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
119 121first strand
Strand 2
B
119 121parallel
Strand 3
A
119 121parallel
Strand 4
C
119 121parallel
Strand 5
E
119 121parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il