Analysis of interatomic Contacts of Structural Units in PDB entry:
8E92

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8E92 entry

There are 4 chains in PDB entry 8E92 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 25	GLN 796
B	THR 31	GLN 799
C	LYS 25	CYS 798
D	THR 31	CYS 798

There are 87 helices in PDB entry 8E92. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	36	50	Right-handed alpha
Helix 2	AA2	A	51	53	Right-handed 310
Helix 3	AA3	A	70	85	Right-handed alpha
Helix 4	AA4	A	104	113	Right-handed alpha
Helix 5	AA5	A	126	130	Right-handed 310
Helix 6	AA6	A	143	158	Right-handed alpha
Helix 7	AA7	A	170	188	Right-handed alpha
Helix 8	AA8	A	204	212	Right-handed alpha
Helix 9	AA9	A	224	238	Right-handed alpha
Helix 10	AB1	A	251	255	Right-handed 310
Helix 11	AB2	A	257	262	Right-handed 310
Helix 12	AB3	A	277	296	Right-handed alpha
Helix 13	AB4	A	317	327	Right-handed alpha
Helix 14	AB5	A	457	471	Right-handed alpha
Helix 15	AB6	A	499	507	Right-handed alpha
Helix 16	AB7	A	520	525	Right-handed alpha
Helix 17	AB8	A	669	674	Right-handed alpha
Helix 18	AB9	A	687	694	Right-handed alpha
Helix 19	AC1	A	699	707	Right-handed alpha
Helix 20	AC2	A	714	716	Right-handed 310
Helix 21	AC3	A	717	723	Right-handed alpha
Helix 22	AC4	A	733	743	Right-handed alpha
Helix 23	AC5	A	768	782	Right-handed alpha
Helix 24	AC6	A	783	794	Right-handed alpha
Helix 25	AC7	B	42	50	Right-handed alpha
Helix 26	AC8	B	73	89	Right-handed alpha
Helix 27	AC9	B	103	116	Right-handed alpha
Helix 28	AD1	B	145	161	Right-handed alpha
Helix 29	AD2	B	174	187	Right-handed alpha
Helix 30	AD3	B	209	219	Right-handed alpha
Helix 31	AD4	B	229	244	Right-handed alpha
Helix 32	AD5	B	284	303	Right-handed alpha
Helix 33	AD6	B	328	334	Right-handed alpha
Helix 34	AD7	B	457	470	Right-handed alpha
Helix 35	AD8	B	486	490	Right-handed 310
Helix 36	AD9	B	492	500	Right-handed alpha
Helix 37	AE1	B	513	518	Right-handed alpha
Helix 38	AE2	B	665	670	Right-handed alpha
Helix 39	AE3	B	688	693	Right-handed alpha
Helix 40	AE4	B	698	703	Right-handed alpha
Helix 41	AE5	B	710	721	Right-handed alpha
Helix 42	AE6	B	730	739	Right-handed alpha
Helix 43	AE7	B	749	753	Right-handed 310
Helix 44	AE8	B	768	783	Right-handed alpha
Helix 45	AE9	B	784	792	Right-handed alpha
Helix 46	AF1	C	35	53	Right-handed alpha
Helix 47	AF2	C	70	85	Right-handed alpha
Helix 48	AF3	C	103	113	Right-handed alpha
Helix 49	AF4	C	125	130	Right-handed 310
Helix 50	AF5	C	145	147	Right-handed 310
Helix 51	AF6	C	148	159	Right-handed alpha
Helix 52	AF7	C	170	187	Right-handed alpha
Helix 53	AF8	C	204	212	Right-handed alpha
Helix 54	AF9	C	224	239	Right-handed alpha
Helix 55	AG1	C	251	254	Right-handed 310
Helix 56	AG2	C	278	296	Right-handed alpha
Helix 57	AG3	C	317	327	Right-handed alpha
Helix 58	AG4	C	458	468	Right-handed alpha
Helix 59	AG5	C	501	508	Right-handed alpha
Helix 60	AG6	C	520	527	Right-handed alpha
Helix 61	AG7	C	669	674	Right-handed alpha
Helix 62	AG8	C	687	694	Right-handed alpha
Helix 63	AG9	C	696	708	Right-handed alpha
Helix 64	AH1	C	713	723	Right-handed alpha
Helix 65	AH2	C	733	743	Right-handed alpha
Helix 66	AH3	C	766	782	Right-handed alpha
Helix 67	AH4	C	783	794	Right-handed alpha
Helix 68	AH5	D	42	51	Right-handed alpha
Helix 69	AH6	D	52	54	Right-handed 310
Helix 70	AH7	D	73	89	Right-handed alpha
Helix 71	AH8	D	103	116	Right-handed alpha
Helix 72	AH9	D	145	158	Right-handed alpha
Helix 73	AI1	D	174	187	Right-handed alpha
Helix 74	AI2	D	208	218	Right-handed alpha
Helix 75	AI3	D	229	243	Right-handed alpha
Helix 76	AI4	D	284	308	Right-handed alpha
Helix 77	AI5	D	327	336	Right-handed alpha
Helix 78	AI6	D	457	470	Right-handed alpha
Helix 79	AI7	D	492	500	Right-handed alpha
Helix 80	AI8	D	513	518	Right-handed alpha
Helix 81	AI9	D	665	670	Right-handed alpha
Helix 82	AJ1	D	688	696	Right-handed alpha
Helix 83	AJ2	D	698	703	Right-handed alpha
Helix 84	AJ3	D	710	721	Right-handed alpha
Helix 85	AJ4	D	730	739	Right-handed alpha
Helix 86	AJ5	D	767	784	Right-handed alpha
Helix 87	AJ6	D	784	794	Right-handed alpha

There are 28 sheets in PDB entry 8E92. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	92	first strand
Strand 2	A	118	120	parallel
Strand 3	A	138	139	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	195	196	first strand
Strand 2	A	164	167	parallel
Strand 3	A	218	222	parallel
Strand 4	A	246	249	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	267	270	first strand
Strand 2	A	351	356	anti-parallel
Strand 3	A	361	367	anti-parallel
Strand 4	A	372	373	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	476	478	first strand
Strand 2	A	400	402	parallel
Strand 3	A	512	513	parallel
Strand 4	A	761	763	anti-parallel
Strand 5	A	527	529	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	410	412	first strand
Strand 2	A	453	456	anti-parallel
Strand 3	A	434	436	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	681	682	first strand
Strand 2	A	728	732	parallel
Strand 3	A	535	541	anti-parallel
Strand 4	A	755	757	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	64	66	first strand
Strand 2	B	32	36	parallel
Strand 3	B	93	96	parallel
Strand 4	B	119	121	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	198	201	first strand
Strand 2	B	166	170	parallel
Strand 3	B	223	227	parallel
Strand 4	B	251	254	parallel
Strand 5	B	274	278	parallel
Strand 6	B	358	363	anti-parallel
Strand 7	B	369	375	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	340	first strand
Strand 2	B	343	344	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	414	417	first strand
Strand 2	B	451	456	anti-parallel
Strand 3	B	431	434	anti-parallel
Strand 4	B	473	477	parallel
Strand 5	B	403	407	parallel
Strand 6	B	505	507	parallel
Strand 7	B	762	763	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	527	528	first strand
Strand 2	B	758	759	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	531	534	first strand
Strand 2	B	726	729	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	65	first strand
Strand 2	C	26	32	parallel
Strand 3	C	87	92	parallel
Strand 4	C	118	120	parallel
Strand 5	C	138	139	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	195	197	first strand
Strand 2	C	163	168	parallel
Strand 3	C	218	222	parallel
Strand 4	C	246	249	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	267	271	first strand
Strand 2	C	351	356	anti-parallel
Strand 3	C	361	367	anti-parallel
Strand 4	C	372	373	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	473	478	first strand
Strand 2	C	397	402	parallel
Strand 3	C	512	513	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	409	412	first strand
Strand 2	C	453	457	anti-parallel
Strand 3	C	434	436	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	485	488	first strand
Strand 2	C	497	500	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	528	529	first strand
Strand 2	C	761	762	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	681	682	first strand
Strand 2	C	728	732	parallel
Strand 3	C	535	543	anti-parallel
Strand 4	C	746	749	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	681	682	first strand
Strand 2	C	728	732	parallel
Strand 3	C	535	543	anti-parallel
Strand 4	C	755	757	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	65	66	first strand
Strand 2	D	32	35	parallel
Strand 3	D	92	95	parallel
Strand 4	D	119	121	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	198	201	first strand
Strand 2	D	167	170	parallel
Strand 3	D	223	227	parallel
Strand 4	D	251	253	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	275	277	first strand
Strand 2	D	358	363	anti-parallel
Strand 3	D	369	376	anti-parallel
Strand 4	D	379	380	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	472	477	first strand
Strand 2	D	402	407	parallel
Strand 3	D	505	506	parallel
Strand 4	D	762	763	anti-parallel
Strand 5	D	521	522	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	416	417	first strand
Strand 2	D	451	454	anti-parallel
Strand 3	D	431	434	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	726	729	first strand
Strand 2	D	528	535	anti-parallel
Strand 3	D	745	746	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	726	729	first strand
Strand 2	D	528	535	anti-parallel
Strand 3	D	754	758	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8E92

Analysis of interatomic Contacts of Structural Units in PDB entry:
8E92