Analysis of interatomic Contacts of Structural Units in PDB entry:
8E9I

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8E9I entry

There are 15 chains in PDB entry 8E9I (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
O	ALA 5	ARG 128
B	GLY 2	ARG 184
A	ALA 2	ASP 122
C	GLY 19	TYR 237
D	GLN 36	ARG 442
E	LEU 6	PRO 237
G	VAL 13	ALA 792
F	THR 2	MET 436
I	LYS 3	PRO 168
H	MET 1	PRO 395
J	ALA 13	ARG 242
K	MET 1	HIS 99
L	PRO 7	GLN 627
N	THR 3	LEU 520
M	THR 4	PRO 521

There are230 helices in PDB entry 8E9I. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	O	15	26	Right-handed alpha
Helix 2	AA2	O	44	55	Right-handed alpha
Helix 3	AA3	O	70	82	Right-handed alpha
Helix 4	AA4	O	94	96	Right-handed 310
Helix 5	AA5	O	97	104	Right-handed alpha
Helix 6	AA6	O	115	127	Right-handed alpha
Helix 7	AA7	B	2	6	Right-handed 310
Helix 8	AA8	B	10	27	Right-handed alpha
Helix 9	AA9	B	36	47	Right-handed alpha
Helix 10	AB1	B	51	56	Right-handed 310
Helix 11	AB2	B	80	91	Right-handed alpha
Helix 12	AB3	B	101	107	Right-handed alpha
Helix 13	AB4	B	118	122	Right-handed 310
Helix 14	AB5	B	135	152	Right-handed alpha
Helix 15	AB6	B	156	171	Right-handed alpha
Helix 16	AB7	B	175	179	Right-handed 310
Helix 17	AB8	A	4	28	Right-handed alpha
Helix 18	AB9	A	34	39	Right-handed alpha
Helix 19	AC1	A	64	79	Right-handed alpha
Helix 20	AC2	A	80	87	Right-handed alpha
Helix 21	AC3	A	92	116	Right-handed alpha
Helix 22	AC4	C	31	34	Right-handed 310
Helix 23	AC5	C	62	75	Right-handed alpha
Helix 24	AC6	C	76	83	Right-handed alpha
Helix 25	AC7	C	102	113	Right-handed alpha
Helix 26	AC8	C	174	187	Right-handed alpha
Helix 27	AC9	D	49	53	Right-handed 310
Helix 28	AD1	D	80	85	Right-handed alpha
Helix 29	AD2	D	86	88	Right-handed 310
Helix 30	AD3	D	92	101	Right-handed alpha
Helix 31	AD4	D	104	121	Right-handed alpha
Helix 32	AD5	D	127	157	Right-handed alpha
Helix 33	AD6	D	159	182	Right-handed alpha
Helix 34	AD7	D	202	226	Right-handed alpha
Helix 35	AD8	D	228	236	Right-handed alpha
Helix 36	AD9	D	242	250	Right-handed alpha
Helix 37	AE1	D	253	258	Right-handed alpha
Helix 38	AE2	D	273	277	Right-handed 310
Helix 39	AE3	D	288	313	Right-handed alpha
Helix 40	AE4	D	342	352	Right-handed alpha
Helix 41	AE5	D	353	366	Right-handed alpha
Helix 42	AE6	D	405	411	Right-handed alpha
Helix 43	AE7	D	413	419	Right-handed alpha
Helix 44	AE8	D	422	434	Right-handed alpha
Helix 45	AE9	D	436	442	Right-handed alpha
Helix 46	AF1	E	26	43	Right-handed alpha
Helix 47	AF2	E	46	49	Right-handed 310
Helix 48	AF3	E	50	62	Right-handed alpha
Helix 49	AF4	E	66	78	Right-handed alpha
Helix 50	AF5	E	80	91	Right-handed alpha
Helix 51	AF6	E	109	115	Right-handed alpha
Helix 52	AF7	E	116	129	Right-handed alpha
Helix 53	AF8	E	169	182	Right-handed alpha
Helix 54	AF9	E	195	204	Right-handed alpha
Helix 55	AG1	E	216	230	Right-handed alpha
Helix 56	AG2	G	32	40	Right-handed alpha
Helix 57	AG3	G	92	109	Right-handed alpha
Helix 58	AG4	G	123	133	Right-handed alpha
Helix 59	AG5	G	167	175	Right-handed alpha
Helix 60	AG6	G	187	191	Right-handed 310
Helix 61	AG7	G	205	213	Right-handed alpha
Helix 62	AG8	G	228	232	Right-handed 310
Helix 63	AG9	G	274	280	Right-handed alpha
Helix 64	AH1	G	281	286	Right-handed 310
Helix 65	AH2	G	305	321	Right-handed alpha
Helix 66	AH3	G	333	346	Right-handed alpha
Helix 67	AH4	G	361	371	Right-handed alpha
Helix 68	AH5	G	380	387	Right-handed alpha
Helix 69	AH6	G	401	416	Right-handed alpha
Helix 70	AH7	G	427	433	Right-handed alpha
Helix 71	AH8	G	444	451	Right-handed alpha
Helix 72	AH9	G	455	460	Right-handed alpha
Helix 73	AI1	G	470	474	Right-handed 310
Helix 74	AI2	G	476	489	Right-handed alpha
Helix 75	AI3	G	499	507	Right-handed alpha
Helix 76	AI4	G	522	533	Right-handed alpha
Helix 77	AI5	G	545	555	Right-handed alpha
Helix 78	AI6	G	567	571	Right-handed 310
Helix 79	AI7	G	573	584	Right-handed alpha
Helix 80	AI8	G	595	601	Right-handed alpha
Helix 81	AI9	G	609	613	Right-handed 310
Helix 82	AJ1	G	637	650	Right-handed alpha
Helix 83	AJ2	G	657	669	Right-handed alpha
Helix 84	AJ3	G	706	710	Right-handed 310
Helix 85	AJ4	G	712	718	Right-handed alpha
Helix 86	AJ5	G	727	734	Right-handed alpha
Helix 87	AJ6	G	775	781	Right-handed alpha
Helix 88	AJ7	F	8	12	Right-handed 310
Helix 89	AJ8	F	19	25	Right-handed alpha
Helix 90	AJ9	F	29	38	Right-handed alpha
Helix 91	AK1	F	39	51	Right-handed alpha
Helix 92	AK2	F	61	68	Right-handed alpha
Helix 93	AK3	F	101	109	Right-handed alpha
Helix 94	AK4	F	110	125	Right-handed alpha
Helix 95	AK5	F	137	154	Right-handed alpha
Helix 96	AK6	F	162	164	Right-handed 310
Helix 97	AK7	F	179	183	Right-handed 310
Helix 98	AK8	F	186	192	Right-handed alpha
Helix 99	AK9	F	209	213	Right-handed 310
Helix 100	AL1	F	220	225	Right-handed alpha
Helix 101	AL2	F	225	240	Right-handed alpha
Helix 102	AL3	F	270	279	Right-handed alpha
Helix 103	AL4	F	303	305	Right-handed 310
Helix 104	AL5	F	310	316	Right-handed alpha
Helix 105	AL6	F	334	350	Right-handed alpha
Helix 106	AL7	F	354	373	Right-handed alpha
Helix 107	AL8	F	377	392	Right-handed alpha
Helix 108	AL9	F	397	421	Right-handed alpha
Helix 109	AM1	F	422	424	Right-handed 310
Helix 110	AM2	F	429	433	Right-handed 310
Helix 111	AM3	I	5	7	Right-handed 310
Helix 112	AM4	I	8	18	Right-handed alpha
Helix 113	AM5	I	58	64	Right-handed alpha
Helix 114	AM6	I	103	109	Right-handed alpha
Helix 115	AM7	I	133	138	Right-handed alpha
Helix 116	AM8	I	157	163	Right-handed alpha
Helix 117	AM9	H	13	47	Right-handed alpha
Helix 118	AN1	H	56	59	Right-handed 310
Helix 119	AN2	H	60	72	Right-handed alpha
Helix 120	AN3	H	82	101	Right-handed alpha
Helix 121	AN4	H	102	104	Right-handed 310
Helix 122	AN5	H	126	149	Right-handed alpha
Helix 123	AN6	H	151	184	Right-handed alpha
Helix 124	AN7	H	187	194	Right-handed alpha
Helix 125	AN8	H	199	204	Right-handed alpha
Helix 126	AN9	H	204	219	Right-handed alpha
Helix 127	AO1	H	229	234	Right-handed alpha
Helix 128	AO2	H	235	239	Right-handed 310
Helix 129	AO3	H	242	269	Right-handed alpha
Helix 130	AO4	H	275	280	Right-handed alpha
Helix 131	AO5	H	288	312	Right-handed alpha
Helix 132	AO6	H	316	327	Right-handed alpha
Helix 133	AO7	H	327	348	Right-handed alpha
Helix 134	AO8	H	351	374	Right-handed alpha
Helix 135	AO9	J	16	40	Right-handed alpha
Helix 136	AP1	J	42	64	Right-handed alpha
Helix 137	AP2	J	66	92	Right-handed alpha
Helix 138	AP3	J	106	127	Right-handed alpha
Helix 139	AP4	J	129	133	Right-handed 310
Helix 140	AP5	J	137	142	Right-handed alpha
Helix 141	AP6	J	144	154	Right-handed alpha
Helix 142	AP7	J	157	179	Right-handed alpha
Helix 143	AP8	J	182	186	Right-handed 310
Helix 144	AP9	J	189	195	Right-handed alpha
Helix 145	AQ1	K	3	24	Right-handed alpha
Helix 146	AQ2	K	26	53	Right-handed alpha
Helix 147	AQ3	K	55	87	Right-handed alpha
Helix 148	AQ4	L	8	25	Right-handed alpha
Helix 149	AQ5	L	26	30	Right-handed 310
Helix 150	AQ6	L	32	58	Right-handed alpha
Helix 151	AQ7	L	87	112	Right-handed alpha
Helix 152	AQ8	L	117	138	Right-handed alpha
Helix 153	AQ9	L	140	161	Right-handed alpha
Helix 154	AR1	L	165	198	Right-handed alpha
Helix 155	AR2	L	201	209	Right-handed alpha
Helix 156	AR3	L	210	212	Right-handed 310
Helix 157	AR4	L	213	233	Right-handed alpha
Helix 158	AR5	L	236	238	Right-handed 310
Helix 159	AR6	L	239	244	Right-handed alpha
Helix 160	AR7	L	245	247	Right-handed 310
Helix 161	AR8	L	248	258	Right-handed alpha
Helix 162	AR9	L	261	271	Right-handed alpha
Helix 163	AS1	L	271	277	Right-handed alpha
Helix 164	AS2	L	278	301	Right-handed alpha
Helix 165	AS3	L	305	327	Right-handed alpha
Helix 166	AS4	L	328	360	Right-handed alpha
Helix 167	AS5	L	365	369	Right-handed 310
Helix 168	AS6	L	371	375	Right-handed 310
Helix 169	AS7	L	376	392	Right-handed alpha
Helix 170	AS8	L	396	412	Right-handed alpha
Helix 171	AS9	L	413	443	Right-handed alpha
Helix 172	AT1	L	459	475	Right-handed alpha
Helix 173	AT2	L	477	482	Right-handed alpha
Helix 174	AT3	L	484	491	Right-handed alpha
Helix 175	AT4	L	504	528	Right-handed alpha
Helix 176	AT5	L	541	548	Right-handed alpha
Helix 177	AT6	L	551	560	Right-handed alpha
Helix 178	AT7	L	560	578	Right-handed alpha
Helix 179	AT8	L	578	599	Right-handed alpha
Helix 180	AT9	L	604	615	Right-handed alpha
Helix 181	AU1	L	615	625	Right-handed alpha
Helix 182	AU2	N	7	31	Right-handed alpha
Helix 183	AU3	N	32	62	Right-handed alpha
Helix 184	AU4	N	79	100	Right-handed alpha
Helix 185	AU5	N	128	138	Right-handed alpha
Helix 186	AU6	N	143	161	Right-handed alpha
Helix 187	AU7	N	163	182	Right-handed alpha
Helix 188	AU8	N	188	222	Right-handed alpha
Helix 189	AU9	N	225	236	Right-handed alpha
Helix 190	AV1	N	239	259	Right-handed alpha
Helix 191	AV2	N	260	264	Right-handed 310
Helix 192	AV3	N	265	274	Right-handed alpha
Helix 193	AV4	N	275	300	Right-handed alpha
Helix 194	AV5	N	302	304	Right-handed 310
Helix 195	AV6	N	305	330	Right-handed alpha
Helix 196	AV7	N	333	355	Right-handed alpha
Helix 197	AV8	N	357	384	Right-handed alpha
Helix 198	AV9	N	395	400	Right-handed 310
Helix 199	AW1	N	401	406	Right-handed alpha
Helix 200	AW2	N	406	422	Right-handed alpha
Helix 201	AW3	N	426	442	Right-handed alpha
Helix 202	AW4	N	444	471	Right-handed alpha
Helix 203	AW5	N	485	505	Right-handed alpha
Helix 204	AW6	N	506	516	Right-handed alpha
Helix 205	AW7	M	6	24	Right-handed alpha
Helix 206	AW8	M	26	28	Right-handed 310
Helix 207	AW9	M	29	55	Right-handed alpha
Helix 208	AX1	M	72	75	Right-handed 310
Helix 209	AX2	M	83	104	Right-handed alpha
Helix 210	AX3	M	113	116	Right-handed 310
Helix 211	AX4	M	117	139	Right-handed alpha
Helix 212	AX5	M	141	152	Right-handed alpha
Helix 213	AX6	M	152	162	Right-handed alpha
Helix 214	AX7	M	167	200	Right-handed alpha
Helix 215	AX8	M	209	220	Right-handed alpha
Helix 216	AX9	M	225	244	Right-handed alpha
Helix 217	AY1	M	246	250	Right-handed 310
Helix 218	AY2	M	251	260	Right-handed alpha
Helix 219	AY3	M	261	270	Right-handed alpha
Helix 220	AY4	M	271	288	Right-handed alpha
Helix 221	AY5	M	288	317	Right-handed alpha
Helix 222	AY6	M	319	341	Right-handed alpha
Helix 223	AY7	M	343	375	Right-handed alpha
Helix 224	AY8	M	379	383	Right-handed 310
Helix 225	AY9	M	385	390	Right-handed alpha
Helix 226	AZ1	M	390	405	Right-handed alpha
Helix 227	AZ2	M	410	425	Right-handed alpha
Helix 228	AZ3	M	427	454	Right-handed alpha
Helix 229	AZ4	M	472	492	Right-handed alpha
Helix 230	AZ5	M	493	511	Right-handed alpha

There are 31 sheets in PDB entry 8E9I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	37	42	first strand
Strand 2	O	7	12	parallel
Strand 3	O	59	63	parallel
Strand 4	O	88	92	parallel
Strand 5	O	108	111	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	69	71	first strand
Strand 2	B	96	100	parallel
Strand 3	B	127	129	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	24	29	first strand
Strand 2	C	47	51	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	90	first strand
Strand 2	C	93	98	anti-parallel
Strand 3	C	150	158	parallel
Strand 4	C	137	145	anti-parallel
Strand 5	C	120	121	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	90	first strand
Strand 2	C	93	98	anti-parallel
Strand 3	C	150	158	parallel
Strand 4	C	137	145	anti-parallel
Strand 5	C	125	128	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	164	166	first strand
Strand 2	C	189	191	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	221	223	first strand
Strand 2	C	226	228	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	41	44	first strand
Strand 2	D	57	63	anti-parallel
Strand 3	D	66	73	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	190	191	first strand
Strand 2	D	194	195	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	332	333	first strand
Strand 2	D	340	341	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	373	381	first strand
Strand 2	D	384	392	anti-parallel
Strand 3	D	400	404	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	141	146	first strand
Strand 2	E	102	107	parallel
Strand 3	E	158	160	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	23	28	first strand
Strand 2	G	15	20	anti-parallel
Strand 3	G	85	87	parallel
Strand 4	G	63	66	anti-parallel
Strand 5	G	73	74	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	150	151	first strand
Strand 2	G	156	158	anti-parallel
Strand 3	G	218	220	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	182	185	first strand
Strand 2	G	192	195	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	233	238	first strand
Strand 2	G	247	253	anti-parallel
Strand 3	G	256	261	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	300	303	first strand
Strand 2	G	294	297	anti-parallel
Strand 3	G	603	606	anti-parallel
Strand 4	G	586	591	parallel
Strand 5	G	560	564	parallel
Strand 6	G	324	327	parallel
Strand 7	G	353	354	parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	436	437	first strand
Strand 2	G	418	422	parallel
Strand 3	G	389	393	parallel
Strand 4	G	464	468	parallel
Strand 5	G	491	495	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	615	618	first strand
Strand 2	G	624	627	anti-parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	693	699	first strand
Strand 2	G	764	768	parallel
Strand 3	G	724	726	anti-parallel
Strand 4	G	750	757	parallel
Strand 5	G	741	745	anti-parallel
Strand 6	G	787	791	anti-parallel
Strand 7	G	693	699	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	158	161	first strand
Strand 2	F	166	175	anti-parallel
Strand 3	F	128	134	parallel
Strand 4	F	87	91	parallel
Strand 5	F	215	219	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	241	242	first strand
Strand 2	F	245	246	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	261	266	first strand
Strand 2	F	248	255	anti-parallel
Strand 3	F	327	330	parallel
Strand 4	F	287	291	anti-parallel
Strand 5	F	300	301	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	42	44	first strand
Strand 2	I	114	116	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	69	75	first strand
Strand 2	I	87	95	anti-parallel
Strand 3	I	131	132	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	109	112	first strand
Strand 2	H	115	118	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	65	66	first strand
Strand 2	L	85	86	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	71	73	first strand
Strand 2	L	80	81	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	67	69	first strand
Strand 2	N	76	78	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	385	386	first strand
Strand 2	N	480	481	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	63	71	first strand
Strand 2	M	76	82	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8E9I

Analysis of interatomic Contacts of Structural Units in PDB entry:
8E9I