Analysis of interatomic Contacts of Structural Units in PDB entry:
8EAS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8EAS entry

There are 18 chains in PDB entry 8EAS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 14	LEU 177
B	MET 1	UNK 161
F	GLU 3	GLY 117
a	GLU 3	ALA 834
b	ASP 211	PRO 260
c	SER 16	GLN 213
d	MET 1	TYR 345
e	SER 2	PHE 71
f	THR 7	ALA 76
g	THR 2	VAL 159
h	THR 2	CYS 160
i	THR 2	CYS 160
j	THR 2	CYS 160
k	THR 2	CYS 160
l	THR 2	VAL 159
m	THR 2	CYS 160
n	THR 2	CYS 160
o	SER 7	GLU 164

There are126 helices in PDB entry 8EAS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	50	Right-handed alpha
Helix 2	AA2	A	61	65	Right-handed 310
Helix 3	AA3	A	131	137	Right-handed 310
Helix 4	AA4	A	143	177	Right-handed alpha
Helix 5	AA5	B	7	18	Right-handed alpha
Helix 6	AA6	B	24	38	Right-handed alpha
Helix 7	AA7	B	41	53	Right-handed alpha
Helix 8	AA8	B	84	107	Right-handed alpha
Helix 9	AA9	B	124	151	Right-handed alpha
Helix 10	AB1	F	13	24	Right-handed alpha
Helix 11	AB2	F	46	59	Right-handed alpha
Helix 12	AB3	F	71	77	Right-handed alpha
Helix 13	AB4	F	77	83	Right-handed alpha
Helix 14	AB5	F	102	105	Right-handed 310
Helix 15	AB6	F	106	115	Right-handed alpha
Helix 16	AB7	a	25	37	Right-handed alpha
Helix 17	AB8	a	55	79	Right-handed alpha
Helix 18	AB9	a	104	146	Right-handed alpha
Helix 19	AC1	a	149	153	Right-handed 310
Helix 20	AC2	a	195	207	Right-handed alpha
Helix 21	AC3	a	242	256	Right-handed alpha
Helix 22	AC4	a	267	269	Right-handed 310
Helix 23	AC5	a	270	325	Right-handed alpha
Helix 24	AC6	a	345	360	Right-handed alpha
Helix 25	AC7	a	387	398	Right-handed alpha
Helix 26	AC8	a	407	423	Right-handed alpha
Helix 27	AC9	a	425	442	Right-handed alpha
Helix 28	AD1	a	442	447	Right-handed alpha
Helix 29	AD2	a	453	461	Right-handed alpha
Helix 30	AD3	a	461	480	Right-handed alpha
Helix 31	AD4	a	519	523	Right-handed 310
Helix 32	AD5	a	527	562	Right-handed alpha
Helix 33	AD6	a	564	571	Right-handed alpha
Helix 34	AD7	a	571	596	Right-handed alpha
Helix 35	AD8	a	597	602	Right-handed alpha
Helix 36	AD9	a	607	618	Right-handed alpha
Helix 37	AE1	a	629	658	Right-handed alpha
Helix 38	AE2	a	710	733	Right-handed alpha
Helix 39	AE3	a	733	753	Right-handed alpha
Helix 40	AE4	a	754	759	Right-handed alpha
Helix 41	AE5	a	762	785	Right-handed alpha
Helix 42	AE6	a	787	803	Right-handed alpha
Helix 43	AE7	a	805	810	Right-handed alpha
Helix 44	AE8	a	826	833	Right-handed alpha
Helix 45	AE9	b	220	246	Right-handed alpha
Helix 46	AF1	c	17	39	Right-handed alpha
Helix 47	AF2	c	41	45	Right-handed 310
Helix 48	AF3	c	46	54	Right-handed alpha
Helix 49	AF4	c	55	90	Right-handed alpha
Helix 50	AF5	c	93	95	Right-handed 310
Helix 51	AF6	c	96	123	Right-handed alpha
Helix 52	AF7	c	129	133	Right-handed 310
Helix 53	AF8	c	135	177	Right-handed alpha
Helix 54	AF9	c	180	206	Right-handed alpha
Helix 55	AG1	d	2	6	Right-handed alpha
Helix 56	AG2	d	6	23	Right-handed alpha
Helix 57	AG3	d	26	35	Right-handed alpha
Helix 58	AG4	d	38	47	Right-handed alpha
Helix 59	AG5	d	64	86	Right-handed alpha
Helix 60	AG6	d	88	116	Right-handed alpha
Helix 61	AG7	d	119	126	Right-handed alpha
Helix 62	AG8	d	136	141	Right-handed 310
Helix 63	AG9	d	144	152	Right-handed alpha
Helix 64	AH1	d	158	163	Right-handed 310
Helix 65	AH2	d	173	200	Right-handed alpha
Helix 66	AH3	d	201	228	Right-handed alpha
Helix 67	AH4	d	234	240	Right-handed alpha
Helix 68	AH5	d	250	257	Right-handed alpha
Helix 69	AH6	d	261	270	Right-handed alpha
Helix 70	AH7	d	283	300	Right-handed alpha
Helix 71	AH8	d	306	332	Right-handed alpha
Helix 72	AH9	e	3	25	Right-handed alpha
Helix 73	AI1	e	29	55	Right-handed alpha
Helix 74	AI2	f	8	33	Right-handed alpha
Helix 75	AI3	f	35	40	Right-handed alpha
Helix 76	AI4	f	48	76	Right-handed alpha
Helix 77	AI5	g	8	46	Right-handed alpha
Helix 78	AI6	g	49	54	Right-handed alpha
Helix 79	AI7	g	54	77	Right-handed alpha
Helix 80	AI8	g	83	122	Right-handed alpha
Helix 81	AI9	g	124	154	Right-handed alpha
Helix 82	AJ1	h	8	43	Right-handed alpha
Helix 83	AJ2	h	46	48	Right-handed 310
Helix 84	AJ3	h	49	54	Right-handed alpha
Helix 85	AJ4	h	54	76	Right-handed alpha
Helix 86	AJ5	h	83	122	Right-handed alpha
Helix 87	AJ6	h	124	153	Right-handed alpha
Helix 88	AJ7	i	8	46	Right-handed alpha
Helix 89	AJ8	i	49	54	Right-handed alpha
Helix 90	AJ9	i	54	76	Right-handed alpha
Helix 91	AK1	i	83	122	Right-handed alpha
Helix 92	AK2	i	124	153	Right-handed alpha
Helix 93	AK3	j	8	43	Right-handed alpha
Helix 94	AK4	j	46	48	Right-handed 310
Helix 95	AK5	j	49	54	Right-handed alpha
Helix 96	AK6	j	54	77	Right-handed alpha
Helix 97	AK7	j	83	120	Right-handed alpha
Helix 98	AK8	j	124	155	Right-handed alpha
Helix 99	AK9	k	8	43	Right-handed alpha
Helix 100	AL1	k	46	48	Right-handed 310
Helix 101	AL2	k	49	54	Right-handed alpha
Helix 102	AL3	k	54	77	Right-handed alpha
Helix 103	AL4	k	83	122	Right-handed alpha
Helix 104	AL5	k	124	152	Right-handed alpha
Helix 105	AL6	l	8	43	Right-handed alpha
Helix 106	AL7	l	46	48	Right-handed 310
Helix 107	AL8	l	49	54	Right-handed alpha
Helix 108	AL9	l	54	77	Right-handed alpha
Helix 109	AM1	l	83	120	Right-handed alpha
Helix 110	AM2	l	124	154	Right-handed alpha
Helix 111	AM3	m	8	43	Right-handed alpha
Helix 112	AM4	m	44	45	Right-handed 310
Helix 113	AM5	m	46	50	Right-handed 310
Helix 114	AM6	m	54	77	Right-handed alpha
Helix 115	AM7	m	83	120	Right-handed alpha
Helix 116	AM8	m	124	155	Right-handed alpha
Helix 117	AM9	n	8	44	Right-handed alpha
Helix 118	AN1	n	46	48	Right-handed 310
Helix 119	AN2	n	49	54	Right-handed alpha
Helix 120	AN3	n	54	78	Right-handed alpha
Helix 121	AN4	n	83	122	Right-handed alpha
Helix 122	AN5	n	124	153	Right-handed alpha
Helix 123	AN6	o	14	49	Right-handed alpha
Helix 124	AN7	o	60	84	Right-handed alpha
Helix 125	AN8	o	91	130	Right-handed alpha
Helix 126	AN9	o	133	164	Right-handed alpha

There are 9 sheets in PDB entry 8EAS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	74	80	first strand
Strand 2	A	83	89	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	39	40	first strand
Strand 2	B	2	5	anti-parallel
Strand 3	B	70	73	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	37	39	first strand
Strand 2	F	7	12	parallel
Strand 3	F	64	70	parallel
Strand 4	F	90	94	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	40	41	first strand
Strand 2	a	334	342	anti-parallel
Strand 3	a	327	329	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	40	41	first strand
Strand 2	a	334	342	anti-parallel
Strand 3	a	14	22	anti-parallel
Strand 4	a	368	370	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	213	217	first strand
Strand 2	a	233	239	anti-parallel
Strand 3	a	186	192	anti-parallel
Strand 4	a	259	261	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	222	224	first strand
Strand 2	a	229	231	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	494	495	first strand
Strand 2	a	509	510	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	506	507	first strand
Strand 2	e	63	64	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8EAS

Analysis of interatomic Contacts of Structural Units in PDB entry:
8EAS