Analysis of interatomic Contacts of Structural Units in PDB entry:
8EAU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8EAU entry

There are 16 chains in PDB entry 8EAU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
a	GLU 3	SER 837
b	ASP 211	SER 257
c	LYS 14	GLN 213
d	MET 1	TYR 345
e	SER 2	GLU 73
f	VAL 5	VAL 73
g	MET 1	THR 155
h	THR 2	CYS 160
i	THR 2	VAL 159
j	THR 2	VAL 159
k	THR 2	VAL 159
l	THR 2	VAL 159
m	THR 2	VAL 159
n	THR 2	VAL 159
o	SER 7	GLU 164
p	ALA 8	GLU 63

There are121 helices in PDB entry 8EAU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	a	25	37	Right-handed alpha
Helix 2	AA2	a	49	53	Right-handed 310
Helix 3	AA3	a	55	79	Right-handed alpha
Helix 4	AA4	a	87	93	Right-handed alpha
Helix 5	AA5	a	105	146	Right-handed alpha
Helix 6	AA6	a	194	207	Right-handed alpha
Helix 7	AA7	a	242	255	Right-handed alpha
Helix 8	AA8	a	266	324	Right-handed alpha
Helix 9	AA9	a	345	361	Right-handed alpha
Helix 10	AB1	a	387	395	Right-handed alpha
Helix 11	AB2	a	407	424	Right-handed alpha
Helix 12	AB3	a	425	441	Right-handed alpha
Helix 13	AB4	a	442	447	Right-handed alpha
Helix 14	AB5	a	453	461	Right-handed alpha
Helix 15	AB6	a	461	479	Right-handed alpha
Helix 16	AB7	a	519	523	Right-handed 310
Helix 17	AB8	a	527	562	Right-handed alpha
Helix 18	AB9	a	564	571	Right-handed alpha
Helix 19	AC1	a	571	596	Right-handed alpha
Helix 20	AC2	a	597	602	Right-handed alpha
Helix 21	AC3	a	607	618	Right-handed alpha
Helix 22	AC4	a	629	660	Right-handed alpha
Helix 23	AC5	a	711	733	Right-handed alpha
Helix 24	AC6	a	734	755	Right-handed alpha
Helix 25	AC7	a	757	761	Right-handed 310
Helix 26	AC8	a	763	784	Right-handed alpha
Helix 27	AC9	a	789	803	Right-handed alpha
Helix 28	AD1	a	805	810	Right-handed alpha
Helix 29	AD2	a	826	831	Right-handed 310
Helix 30	AD3	b	220	246	Right-handed alpha
Helix 31	AD4	b	250	254	Right-handed 310
Helix 32	AD5	c	16	39	Right-handed alpha
Helix 33	AD6	c	41	45	Right-handed 310
Helix 34	AD7	c	46	54	Right-handed alpha
Helix 35	AD8	c	55	90	Right-handed alpha
Helix 36	AD9	c	91	92	Right-handed 310
Helix 37	AE1	c	93	94	Right-handed 310
Helix 38	AE2	c	95	123	Right-handed alpha
Helix 39	AE3	c	129	133	Right-handed 310
Helix 40	AE4	c	135	177	Right-handed alpha
Helix 41	AE5	c	180	208	Right-handed alpha
Helix 42	AE6	d	2	7	Right-handed alpha
Helix 43	AE7	d	9	23	Right-handed alpha
Helix 44	AE8	d	26	35	Right-handed alpha
Helix 45	AE9	d	38	48	Right-handed alpha
Helix 46	AF1	d	64	86	Right-handed alpha
Helix 47	AF2	d	88	111	Right-handed alpha
Helix 48	AF3	d	128	132	Right-handed 310
Helix 49	AF4	d	136	142	Right-handed 310
Helix 50	AF5	d	144	146	Right-handed 310
Helix 51	AF6	d	147	152	Right-handed alpha
Helix 52	AF7	d	153	156	Right-handed 310
Helix 53	AF8	d	177	200	Right-handed alpha
Helix 54	AF9	d	201	228	Right-handed alpha
Helix 55	AG1	d	236	241	Right-handed 310
Helix 56	AG2	d	250	259	Right-handed alpha
Helix 57	AG3	d	261	270	Right-handed alpha
Helix 58	AG4	d	283	301	Right-handed alpha
Helix 59	AG5	d	306	332	Right-handed alpha
Helix 60	AG6	d	334	338	Right-handed 310
Helix 61	AG7	e	4	25	Right-handed alpha
Helix 62	AG8	e	29	55	Right-handed alpha
Helix 63	AG9	e	68	72	Right-handed 310
Helix 64	AH1	f	6	33	Right-handed alpha
Helix 65	AH2	f	35	40	Right-handed alpha
Helix 66	AH3	f	47	72	Right-handed alpha
Helix 67	AH4	g	8	44	Right-handed alpha
Helix 68	AH5	g	46	48	Right-handed 310
Helix 69	AH6	g	49	54	Right-handed alpha
Helix 70	AH7	g	54	76	Right-handed alpha
Helix 71	AH8	g	83	122	Right-handed alpha
Helix 72	AH9	g	124	152	Right-handed alpha
Helix 73	AI1	h	8	44	Right-handed alpha
Helix 74	AI2	h	46	48	Right-handed 310
Helix 75	AI3	h	49	54	Right-handed alpha
Helix 76	AI4	h	54	77	Right-handed alpha
Helix 77	AI5	h	83	120	Right-handed alpha
Helix 78	AI6	h	124	154	Right-handed alpha
Helix 79	AI7	i	8	44	Right-handed alpha
Helix 80	AI8	i	46	48	Right-handed 310
Helix 81	AI9	i	49	54	Right-handed alpha
Helix 82	AJ1	i	54	78	Right-handed alpha
Helix 83	AJ2	i	83	122	Right-handed alpha
Helix 84	AJ3	i	124	155	Right-handed alpha
Helix 85	AJ4	j	8	44	Right-handed alpha
Helix 86	AJ5	j	46	48	Right-handed 310
Helix 87	AJ6	j	49	54	Right-handed alpha
Helix 88	AJ7	j	54	78	Right-handed alpha
Helix 89	AJ8	j	83	120	Right-handed alpha
Helix 90	AJ9	j	124	154	Right-handed alpha
Helix 91	AK1	k	8	43	Right-handed alpha
Helix 92	AK2	k	44	45	Right-handed 310
Helix 93	AK3	k	46	48	Right-handed 310
Helix 94	AK4	k	49	54	Right-handed alpha
Helix 95	AK5	k	54	76	Right-handed alpha
Helix 96	AK6	k	83	122	Right-handed alpha
Helix 97	AK7	k	125	153	Right-handed alpha
Helix 98	AK8	l	8	46	Right-handed alpha
Helix 99	AK9	l	49	54	Right-handed alpha
Helix 100	AL1	l	54	76	Right-handed alpha
Helix 101	AL2	l	83	120	Right-handed alpha
Helix 102	AL3	l	124	153	Right-handed alpha
Helix 103	AL4	m	8	40	Right-handed alpha
Helix 104	AL5	m	41	44	Right-handed 310
Helix 105	AL6	m	45	49	Right-handed 310
Helix 106	AL7	m	54	77	Right-handed alpha
Helix 107	AL8	m	83	122	Right-handed alpha
Helix 108	AL9	m	124	153	Right-handed alpha
Helix 109	AM1	n	8	37	Right-handed alpha
Helix 110	AM2	n	41	46	Right-handed alpha
Helix 111	AM3	n	53	78	Right-handed alpha
Helix 112	AM4	n	83	118	Right-handed alpha
Helix 113	AM5	n	123	153	Right-handed alpha
Helix 114	AM6	o	14	48	Right-handed alpha
Helix 115	AM7	o	55	60	Right-handed alpha
Helix 116	AM8	o	60	83	Right-handed alpha
Helix 117	AM9	o	91	128	Right-handed alpha
Helix 118	AN1	o	130	132	Right-handed 310
Helix 119	AN2	o	133	163	Right-handed alpha
Helix 120	AN3	p	9	35	Right-handed alpha
Helix 121	AN4	p	37	63	Right-handed alpha

There are 6 sheets in PDB entry 8EAU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	40	41	first strand
Strand 2	a	334	342	anti-parallel
Strand 3	a	327	329	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	40	41	first strand
Strand 2	a	334	342	anti-parallel
Strand 3	a	14	22	anti-parallel
Strand 4	a	367	371	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	213	217	first strand
Strand 2	a	233	240	anti-parallel
Strand 3	a	185	192	anti-parallel
Strand 4	a	259	261	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	222	224	first strand
Strand 2	a	229	231	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	494	495	first strand
Strand 2	a	509	510	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	506	507	first strand
Strand 2	e	63	64	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8EAU

Analysis of interatomic Contacts of Structural Units in PDB entry:
8EAU