Analysis of interatomic Contacts of Structural Units in PDB entry:
8EAZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8EAZ entry

There are 8 chains in PDB entry 8EAZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 257	HIS 510
B	VAL 266	HIS 510
C	ALA 2	VAL 153
D	ALA 2	VAL 153
E	MET 1	GLY 76
F	MET 1	GLY 76
G	MET 1	GLY 75
H	MET 1	GLY 76

There are 33 helices in PDB entry 8EAZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	257	262	Right-handed alpha
Helix 2	AA2	A	263	269	Right-handed alpha
Helix 3	AA3	A	305	315	Right-handed alpha
Helix 4	AA4	A	337	343	Right-handed alpha
Helix 5	AA5	A	346	365	Right-handed alpha
Helix 6	AA6	A	410	424	Right-handed alpha
Helix 7	AA7	A	425	441	Right-handed alpha
Helix 8	AA8	A	496	500	Right-handed 310
Helix 9	AA9	B	305	315	Right-handed alpha
Helix 10	AB1	B	337	343	Right-handed alpha
Helix 11	AB2	B	346	365	Right-handed alpha
Helix 12	AB3	B	410	424	Right-handed alpha
Helix 13	AB4	B	425	441	Right-handed alpha
Helix 14	AB5	B	496	500	Right-handed 310
Helix 15	AB6	C	3	18	Right-handed alpha
Helix 16	AB7	C	87	91	Right-handed 310
Helix 17	AB8	C	100	114	Right-handed alpha
Helix 18	AB9	C	122	132	Right-handed alpha
Helix 19	AC1	C	132	148	Right-handed alpha
Helix 20	AC2	D	3	18	Right-handed alpha
Helix 21	AC3	D	87	91	Right-handed 310
Helix 22	AC4	D	100	114	Right-handed alpha
Helix 23	AC5	D	122	131	Right-handed alpha
Helix 24	AC6	D	132	148	Right-handed alpha
Helix 25	AC7	E	22	35	Right-handed alpha
Helix 26	AC8	E	37	39	Right-handed 310
Helix 27	AC9	E	56	60	Right-handed 310
Helix 28	AD1	F	22	35	Right-handed alpha
Helix 29	AD2	F	37	39	Right-handed 310
Helix 30	AD3	G	22	35	Right-handed alpha
Helix 31	AD4	G	37	39	Right-handed 310
Helix 32	AD5	H	22	35	Right-handed alpha
Helix 33	AD6	H	37	39	Right-handed 310

There are 18 sheets in PDB entry 8EAZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	280	281	first strand
Strand 2	A	288	289	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	295	296	first strand
Strand 2	A	303	304	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	368	370	first strand
Strand 2	A	379	381	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	388	390	first strand
Strand 2	A	397	399	anti-parallel
Strand 3	A	404	405	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	445	446	first strand
Strand 2	A	453	457	anti-parallel
Strand 3	E	66	74	parallel
Strand 4	E	2	6	parallel
Strand 5	E	12	16	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	445	446	first strand
Strand 2	A	453	457	anti-parallel
Strand 3	E	66	74	parallel
Strand 4	E	41	45	anti-parallel
Strand 5	E	48	49	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	462	464	first strand
Strand 2	A	471	473	anti-parallel
Strand 3	A	478	479	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	280	281	first strand
Strand 2	B	288	289	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	295	296	first strand
Strand 2	B	303	304	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	368	370	first strand
Strand 2	B	379	381	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	388	390	first strand
Strand 2	B	397	399	anti-parallel
Strand 3	B	404	405	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	446	first strand
Strand 2	B	453	457	anti-parallel
Strand 3	F	66	74	parallel
Strand 4	F	2	6	parallel
Strand 5	F	12	16	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	446	first strand
Strand 2	B	453	457	anti-parallel
Strand 3	F	66	74	parallel
Strand 4	F	41	45	anti-parallel
Strand 5	F	48	49	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	462	464	first strand
Strand 2	B	471	473	anti-parallel
Strand 3	B	478	479	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	22	27	first strand
Strand 2	C	34	39	anti-parallel
Strand 3	C	51	56	anti-parallel
Strand 4	C	67	70	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	22	26	first strand
Strand 2	D	34	39	anti-parallel
Strand 3	D	51	56	anti-parallel
Strand 4	D	67	70	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	12	16	first strand
Strand 2	G	2	7	anti-parallel
Strand 3	G	66	71	parallel
Strand 4	G	41	45	anti-parallel
Strand 5	G	48	49	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	12	16	first strand
Strand 2	H	2	7	anti-parallel
Strand 3	H	66	71	parallel
Strand 4	H	41	45	anti-parallel
Strand 5	H	48	49	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8EAZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8EAZ