Analysis of interatomic Contacts of Structural Units in PDB entry:
8ECG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ECG entry

There is 1 chain in PDB entry 8ECG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 198GLN 566
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 8ECG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
200 208Right-handed alpha
Helix 2
AA2
A
266 281Right-handed alpha
Helix 3
AA3
A
304 316Right-handed alpha
Helix 4
AA4
A
317 319Right-handed 310
Helix 5
AA5
A
320 329Right-handed alpha
Helix 6
AA6
A
362 377Right-handed alpha
Helix 7
AA7
A
400 407Right-handed alpha
Helix 8
AA8
A
420 426Right-handed alpha
Helix 9
AA9
A
430 441Right-handed alpha
Helix 10
AB1
A
443 449Right-handed alpha
Helix 11
AB2
A
458 470Right-handed alpha
Helix 12
AB3
A
476 481Right-handed alpha
Helix 13
AB4
A
511 515Right-handed 310
Helix 14
AB5
A
516 526Right-handed alpha
Helix 15
AB6
A
537 565Right-handed alpha
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There are 3 sheets in PDB entry 8ECG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 252first strand
Strand 2
A
255 262anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 345first strand
Strand 2
A
348 356anti-parallel
Strand 3
A
299 301anti-parallel
Strand 4
A
385 388anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 345first strand
Strand 2
A
348 356anti-parallel
Strand 3
A
286 296anti-parallel
Strand 4
A
409 419anti-parallel
Strand 5
A
495 505anti-parallel
Strand 6
A
483 490anti-parallel
Strand 7
A
454 455parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il