Analysis of interatomic Contacts of Structural Units in PDB entry:
8EDL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EDL entry

There is 1 chain in PDB entry 8EDL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 582GLY 1090
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 8EDL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
582 588Right-handed alpha
Helix 2
AA2
A
592 618Right-handed alpha
Helix 3
AA3
A
678 697Right-handed alpha
Helix 4
AA4
A
700 721Right-handed alpha
Helix 5
AA5
A
727 731Right-handed 310
Helix 6
AA6
A
734 747Right-handed alpha
Helix 7
AA7
A
751 766Right-handed alpha
Helix 8
AA8
A
770 794Right-handed alpha
Helix 9
AA9
A
830 857Right-handed alpha
Helix 10
AB1
A
890 902Right-handed alpha
Helix 11
AB2
A
909 924Right-handed alpha
Helix 12
AB3
A
926 928Right-handed 310
Helix 13
AB4
A
929 943Right-handed alpha
Helix 14
AB5
A
954 974Right-handed alpha
Helix 15
AB6
A
979 984Right-handed alpha
Helix 16
AB7
A
988 1001Right-handed alpha
Helix 17
AB8
A
1005 1024Right-handed alpha
Helix 18
AB9
A
1033 1047Right-handed alpha
Helix 19
AC1
A
1058 1081Right-handed alpha
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There are no sheets in PDB entry 8EDL
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il