Analysis of interatomic Contacts of Structural Units in PDB entry:
8EDO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EDO entry

There are 2 chains in PDB entry 8EDO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 1039SER 2019
B
 SER 1164GLN 2281
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 8EDO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1041 1049Right-handed alpha
Helix 2
AA2
A
1058 1081Right-handed alpha
Helix 3
AA3
A
1094 1116Right-handed alpha
Helix 4
AA4
A
1136 1156Right-handed alpha
Helix 5
AA5
A
1160 1165Right-handed alpha
Helix 6
AA6
A
1166 1168Right-handed 310
Helix 7
AA7
A
1172 1188Right-handed alpha
Helix 8
AA8
A
1828 1842Right-handed alpha
Helix 9
AA9
A
1845 1864Right-handed alpha
Helix 10
AB1
A
1883 1898Right-handed alpha
Helix 11
AB2
A
1903 1914Right-handed alpha
Helix 12
AB3
A
1917 1929Right-handed alpha
Helix 13
AB4
A
1931 1937Right-handed 310
Helix 14
AB5
A
1943 1964Right-handed alpha
Helix 15
AB6
A
1967 1980Right-handed alpha
Helix 16
AB7
A
1985 2001Right-handed alpha
Helix 17
AB8
A
2004 2019Right-handed alpha
Helix 18
AB9
B
1164 1169Right-handed 310
Helix 19
AC1
B
1828 1842Right-handed alpha
Helix 20
AC2
B
1883 1898Right-handed alpha
Helix 21
AC3
B
1903 1916Right-handed alpha
Helix 22
AC4
B
1917 1933Right-handed alpha
Helix 23
AC5
B
1934 1937Right-handed 310
Helix 24
AC6
B
1943 1964Right-handed alpha
Helix 25
AC7
B
1967 1980Right-handed alpha
Helix 26
AC8
B
1982 1984Right-handed 310
Helix 27
AC9
B
1985 2001Right-handed alpha
Helix 28
AD1
B
2004 2021Right-handed alpha
Helix 29
AD2
B
2021 2040Right-handed alpha
Helix 30
AD3
B
2041 2043Right-handed 310
Helix 31
AD4
B
2047 2052Right-handed 310
Helix 32
AD5
B
2053 2069Right-handed alpha
Helix 33
AD6
B
2070 2072Right-handed 310
Helix 34
AD7
B
2074 2090Right-handed alpha
Helix 35
AD8
B
2094 2114Right-handed alpha
Helix 36
AD9
B
2121 2135Right-handed alpha
Helix 37
AE1
B
2137 2144Right-handed alpha
Helix 38
AE2
B
2151 2157Right-handed alpha
Helix 39
AE3
B
2177 2197Right-handed alpha
Helix 40
AE4
B
2203 2217Right-handed alpha
Helix 41
AE5
B
2222 2235Right-handed alpha
Helix 42
AE6
B
2239 2260Right-handed alpha
Helix 43
AE7
B
2262 2281Right-handed alpha
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There are no sheets in PDB entry 8EDO
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