Analysis of interatomic Contacts of Structural Units in PDB entry:
8EEB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EEB entry

There is 1 chain in PDB entry 8EEB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 3ASP 2103
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 80 helices in PDB entry 8EEB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 20Right-handed alpha
Helix 2
AA2
A
21 46Right-handed alpha
Helix 3
AA3
A
66 76Right-handed alpha
Helix 4
AA4
A
86 90Right-handed 310
Helix 5
AA5
A
100 115Right-handed alpha
Helix 6
AA6
A
116 135Right-handed alpha
Helix 7
AA7
A
178 196Right-handed alpha
Helix 8
AA8
A
197 208Right-handed alpha
Helix 9
AA9
A
215 225Right-handed alpha
Helix 10
AB1
A
265 277Right-handed alpha
Helix 11
AB2
A
277 292Right-handed alpha
Helix 12
AB3
A
301 319Right-handed alpha
Helix 13
AB4
A
320 338Right-handed alpha
Helix 14
AB5
A
342 359Right-handed alpha
Helix 15
AB6
A
367 377Right-handed alpha
Helix 16
AB7
A
385 406Right-handed alpha
Helix 17
AB8
A
417 430Right-handed alpha
Helix 18
AB9
A
442 446Right-handed 310
Helix 19
AC1
A
502 520Right-handed alpha
Helix 20
AC2
A
541 575Right-handed alpha
Helix 21
AC3
A
576 585Right-handed alpha
Helix 22
AC4
A
587 600Right-handed alpha
Helix 23
AC5
A
600 617Right-handed alpha
Helix 24
AC6
A
624 647Right-handed alpha
Helix 25
AC7
A
652 666Right-handed alpha
Helix 26
AC8
A
668 677Right-handed alpha
Helix 27
AC9
A
682 690Right-handed alpha
Helix 28
AD1
A
692 709Right-handed alpha
Helix 29
AD2
A
715 719Right-handed 310
Helix 30
AD3
A
729 752Right-handed alpha
Helix 31
AD4
A
753 755Right-handed 310
Helix 32
AD5
A
846 855Right-handed alpha
Helix 33
AD6
A
872 876Right-handed alpha
Helix 34
AD7
A
877 881Right-handed 310
Helix 35
AD8
A
897 910Right-handed alpha
Helix 36
AD9
A
915 927Right-handed alpha
Helix 37
AE1
A
929 934Right-handed alpha
Helix 38
AE2
A
944 953Right-handed alpha
Helix 39
AE3
A
971 985Right-handed alpha
Helix 40
AE4
A
998 1004Right-handed alpha
Helix 41
AE5
A
1074 1086Right-handed alpha
Helix 42
AE6
A
1109 1122Right-handed alpha
Helix 43
AE7
A
1138 1150Right-handed alpha
Helix 44
AE8
A
1215 1235Right-handed alpha
Helix 45
AE9
A
1235 1256Right-handed alpha
Helix 46
AF1
A
1272 1276Right-handed 310
Helix 47
AF2
A
1290 1305Right-handed alpha
Helix 48
AF3
A
1310 1315Right-handed alpha
Helix 49
AF4
A
1324 1334Right-handed alpha
Helix 50
AF5
A
1388 1400Right-handed alpha
Helix 51
AF6
A
1401 1404Right-handed 310
Helix 52
AF7
A
1428 1443Right-handed alpha
Helix 53
AF8
A
1451 1464Right-handed alpha
Helix 54
AF9
A
1465 1467Right-handed 310
Helix 55
AG1
A
1481 1499Right-handed alpha
Helix 56
AG2
A
1502 1508Right-handed alpha
Helix 57
AG3
A
1520 1530Right-handed alpha
Helix 58
AG4
A
1532 1553Right-handed alpha
Helix 59
AG5
A
1553 1563Right-handed alpha
Helix 60
AG6
A
1564 1571Right-handed alpha
Helix 61
AG7
A
1575 1606Right-handed alpha
Helix 62
AG8
A
1607 1611Right-handed 310
Helix 63
AG9
A
1615 1631Right-handed alpha
Helix 64
AH1
A
1632 1639Right-handed 310
Helix 65
AH2
A
1643 1671Right-handed alpha
Helix 66
AH3
A
1675 1686Right-handed alpha
Helix 67
AH4
A
1691 1716Right-handed alpha
Helix 68
AH5
A
1730 1753Right-handed alpha
Helix 69
AH6
A
1775 1786Right-handed alpha
Helix 70
AH7
A
1832 1842Right-handed alpha
Helix 71
AH8
A
1861 1868Right-handed alpha
Helix 72
AH9
A
1883 1895Right-handed alpha
Helix 73
AI1
A
1898 1912Right-handed alpha
Helix 74
AI2
A
1927 1941Right-handed alpha
Helix 75
AI3
A
1957 1975Right-handed alpha
Helix 76
AI4
A
1985 1992Right-handed alpha
Helix 77
AI5
A
2008 2016Right-handed alpha
Helix 78
AI6
A
2030 2042Right-handed alpha
Helix 79
AI7
A
2067 2081Right-handed alpha
Helix 80
AI8
A
2094 2103Right-handed alpha
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There are 11 sheets in PDB entry 8EEB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 51first strand
Strand 2
A
537 539anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 60first strand
Strand 2
A
526 531anti-parallel
Strand 3
A
1470 1475parallel
Strand 4
A
1415 1419anti-parallel
Strand 5
A
1280 1285parallel
Strand 6
A
1378 1380parallel
Strand 7
A
1370 1372anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
295 297first strand
Strand 2
A
436 439parallel
Strand 3
A
461 467anti-parallel
Strand 4
A
1509 1514parallel
Strand 5
A
1269 1270anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
807 808first strand
Strand 2
A
830 831anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
810 813first strand
Strand 2
A
862 864anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
883 886first strand
Strand 2
A
960 964parallel
Strand 3
A
990 994parallel
Strand 4
A
836 840parallel
Strand 5
A
1007 1011parallel
Strand 6
A
1016 1020anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
866 867first strand
Strand 2
A
870 871anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1090 1093first strand
Strand 2
A
1098 1104anti-parallel
Strand 3
A
1031 1038anti-parallel
Strand 4
A
1132 1135anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1810 1817first strand
Strand 2
A
1793 1800anti-parallel
Strand 3
A
1850 1853anti-parallel
Strand 4
A
1856 1857anti-parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1869 1872first strand
Strand 2
A
1946 1950parallel
Strand 3
A
1977 1981parallel
Strand 4
A
1822 1827parallel
Strand 5
A
1994 1999parallel
Strand 6
A
2002 2003anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2046 2048first strand
Strand 2
A
2056 2058anti-parallel
Strand 3
A
2021 2025anti-parallel
Strand 4
A
2085 2089anti-parallel
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