Analysis of interatomic Contacts of Structural Units in PDB entry:
8EFU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EFU entry

There are 5 chains in PDB entry 8EFU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 94ASP 226
B
 THR 94ASP 226
C
 THR 94ASP 226
D
 THR 94ASP 226
E
 THR 94ASP 226
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 8EFU

There are 9 sheets in PDB entry 8EFU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
95 99first strand
Strand 2
C
95 99parallel
Strand 3
A
95 99parallel
Strand 4
B
95 99parallel
Strand 5
E
95 99parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
105 110first strand
Strand 2
C
105 110parallel
Strand 3
A
105 110parallel
Strand 4
B
105 110parallel
Strand 5
E
105 110parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
138 139first strand
Strand 2
C
138 139parallel
Strand 3
A
138 139parallel
Strand 4
B
138 139parallel
Strand 5
E
138 139parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
160 162first strand
Strand 2
C
160 162parallel
Strand 3
A
160 162parallel
Strand 4
B
160 162parallel
Strand 5
E
160 162parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
166 170first strand
Strand 2
C
166 170parallel
Strand 3
A
166 170parallel
Strand 4
B
166 170parallel
Strand 5
E
166 170parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
173 175first strand
Strand 2
C
173 175parallel
Strand 3
A
173 175parallel
Strand 4
B
173 175parallel
Strand 5
E
173 175parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
181 192first strand
Strand 2
C
181 192parallel
Strand 3
A
181 192parallel
Strand 4
B
181 192parallel
Strand 5
E
181 192parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
217 219first strand
Strand 2
C
217 219parallel
Strand 3
A
217 219parallel
Strand 4
B
217 219parallel
Strand 5
E
217 219parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
222 223first strand
Strand 2
C
222 223parallel
Strand 3
A
222 223parallel
Strand 4
B
222 223parallel
Strand 5
E
222 223parallel
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