Analysis of interatomic Contacts of Structural Units in PDB entry:
8EH9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8EH9 entry

There are 8 chains in PDB entry 8EH9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	G 1	A 31
B	T 2	C 32
R	G 10	U 19
G	PHE 8	PHE 231
H	VAL 5	LEU 234
I	VAL 2	ASP 1341
J	GLU 16	ARG 1373
K	ALA 2	LEU 80

There are104 helices in PDB entry 8EH9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	34	50	Right-handed alpha
Helix 2	AA2	G	77	87	Right-handed alpha
Helix 3	AA3	G	113	115	Right-handed 310
Helix 4	AA4	G	154	158	Right-handed 310
Helix 5	AA5	G	212	229	Right-handed alpha
Helix 6	AA6	H	34	50	Right-handed alpha
Helix 7	AA7	H	77	87	Right-handed alpha
Helix 8	AA8	H	113	115	Right-handed 310
Helix 9	AA9	H	212	228	Right-handed alpha
Helix 10	AB1	I	30	40	Right-handed alpha
Helix 11	AB2	I	42	47	Right-handed 310
Helix 12	AB3	I	48	57	Right-handed alpha
Helix 13	AB4	I	81	89	Right-handed alpha
Helix 14	AB5	I	206	213	Right-handed alpha
Helix 15	AB6	I	216	225	Right-handed alpha
Helix 16	AB7	I	242	247	Right-handed 310
Helix 17	AB8	I	270	281	Right-handed alpha
Helix 18	AB9	I	288	295	Right-handed 310
Helix 19	AC1	I	318	329	Right-handed alpha
Helix 20	AC2	I	345	354	Right-handed alpha
Helix 21	AC3	I	358	371	Right-handed alpha
Helix 22	AC4	I	377	390	Right-handed alpha
Helix 23	AC5	I	398	409	Right-handed alpha
Helix 24	AC6	I	421	438	Right-handed alpha
Helix 25	AC7	I	447	451	Right-handed 310
Helix 26	AC8	I	455	480	Right-handed alpha
Helix 27	AC9	I	495	508	Right-handed alpha
Helix 28	AD1	I	519	528	Right-handed alpha
Helix 29	AD2	I	544	549	Right-handed alpha
Helix 30	AD3	I	551	555	Right-handed 310
Helix 31	AD4	I	609	614	Right-handed alpha
Helix 32	AD5	I	656	660	Right-handed 310
Helix 33	AD6	I	664	668	Right-handed 310
Helix 34	AD7	I	676	688	Right-handed alpha
Helix 35	AD8	I	704	712	Right-handed alpha
Helix 36	AD9	I	820	825	Right-handed alpha
Helix 37	AE1	I	942	980	Right-handed alpha
Helix 38	AE2	I	987	992	Right-handed alpha
Helix 39	AE3	I	1005	1038	Right-handed alpha
Helix 40	AE4	I	1099	1103	Right-handed 310
Helix 41	AE5	I	1109	1134	Right-handed alpha
Helix 42	AE6	I	1137	1150	Right-handed alpha
Helix 43	AE7	I	1160	1164	Right-handed 310
Helix 44	AE8	I	1169	1176	Right-handed alpha
Helix 45	AE9	I	1191	1202	Right-handed alpha
Helix 46	AF1	I	1238	1242	Right-handed 310
Helix 47	AF2	I	1271	1280	Right-handed alpha
Helix 48	AF3	I	1283	1292	Right-handed alpha
Helix 49	AF4	I	1298	1309	Right-handed alpha
Helix 50	AF5	I	1320	1332	Right-handed alpha
Helix 51	AF6	J	26	34	Right-handed alpha
Helix 52	AF7	J	77	81	Right-handed 310
Helix 53	AF8	J	95	100	Right-handed 310
Helix 54	AF9	J	114	117	Right-handed 310
Helix 55	AG1	J	122	128	Right-handed alpha
Helix 56	AG2	J	131	140	Right-handed alpha
Helix 57	AG3	J	161	173	Right-handed alpha
Helix 58	AG4	J	181	191	Right-handed alpha
Helix 59	AG5	J	193	208	Right-handed alpha
Helix 60	AG6	J	210	230	Right-handed alpha
Helix 61	AG7	J	233	236	Right-handed 310
Helix 62	AG8	J	246	250	Right-handed 310
Helix 63	AG9	J	263	285	Right-handed alpha
Helix 64	AH1	J	288	308	Right-handed alpha
Helix 65	AH2	J	336	341	Right-handed alpha
Helix 66	AH3	J	370	377	Right-handed alpha
Helix 67	AH4	J	377	388	Right-handed alpha
Helix 68	AH5	J	393	403	Right-handed alpha
Helix 69	AH6	J	405	416	Right-handed alpha
Helix 70	AH7	J	430	432	Right-handed 310
Helix 71	AH8	J	450	452	Right-handed 310
Helix 72	AH9	J	453	458	Right-handed alpha
Helix 73	AI1	J	473	483	Right-handed alpha
Helix 74	AI2	J	485	489	Right-handed 310
Helix 75	AI3	J	505	514	Right-handed alpha
Helix 76	AI4	J	529	540	Right-handed alpha
Helix 77	AI5	J	573	581	Right-handed alpha
Helix 78	AI6	J	597	612	Right-handed alpha
Helix 79	AI7	J	614	634	Right-handed alpha
Helix 80	AI8	J	649	670	Right-handed alpha
Helix 81	AI9	J	674	704	Right-handed alpha
Helix 82	AJ1	J	720	728	Right-handed alpha
Helix 83	AJ2	J	733	741	Right-handed alpha
Helix 84	AJ3	J	770	790	Right-handed alpha
Helix 85	AJ4	J	790	804	Right-handed alpha
Helix 86	AJ5	J	834	840	Right-handed alpha
Helix 87	AJ6	J	865	875	Right-handed alpha
Helix 88	AJ7	J	884	888	Right-handed 310
Helix 89	AJ8	J	914	925	Right-handed alpha
Helix 90	AJ9	J	926	932	Right-handed alpha
Helix 91	AK1	J	1069	1074	Right-handed 310
Helix 92	AK2	J	1139	1147	Right-handed alpha
Helix 93	AK3	J	1218	1243	Right-handed alpha
Helix 94	AK4	J	1249	1261	Right-handed alpha
Helix 95	AK5	J	1282	1295	Right-handed alpha
Helix 96	AK6	J	1308	1315	Right-handed alpha
Helix 97	AK7	J	1318	1326	Right-handed alpha
Helix 98	AK8	J	1327	1339	Right-handed alpha
Helix 99	AK9	J	1347	1354	Right-handed alpha
Helix 100	AL1	J	1362	1372	Right-handed alpha
Helix 101	AL2	K	6	13	Right-handed alpha
Helix 102	AL3	K	17	32	Right-handed alpha
Helix 103	AL4	K	45	57	Right-handed alpha
Helix 104	AL5	K	60	78	Right-handed alpha

There are 46 sheets in PDB entry 8EH9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	12	17	first strand
Strand 2	G	23	32	anti-parallel
Strand 3	G	198	207	anti-parallel
Strand 4	G	180	189	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	97	99	first strand
Strand 2	G	145	149	anti-parallel
Strand 3	G	53	59	anti-parallel
Strand 4	G	171	172	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	102	104	first strand
Strand 2	G	140	142	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	108	111	first strand
Strand 2	G	129	133	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	151	153	first strand
Strand 2	G	175	177	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	12	15	first strand
Strand 2	H	25	31	anti-parallel
Strand 3	H	198	207	anti-parallel
Strand 4	H	180	190	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	97	101	first strand
Strand 2	H	142	150	anti-parallel
Strand 3	H	52	61	anti-parallel
Strand 4	H	171	172	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	90	91	first strand
Strand 2	H	122	123	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	108	111	first strand
Strand 2	H	129	133	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	152	153	first strand
Strand 2	H	175	176	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	59	60	first strand
Strand 2	I	66	69	anti-parallel
Strand 3	I	93	105	anti-parallel
Strand 4	I	73	75	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	59	60	first strand
Strand 2	I	66	69	anti-parallel
Strand 3	I	93	105	anti-parallel
Strand 4	I	114	128	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	136	137	first strand
Strand 2	I	142	145	anti-parallel
Strand 3	I	512	514	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	147	148	first strand
Strand 2	I	530	531	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	154	158	first strand
Strand 2	I	173	177	anti-parallel
Strand 3	I	185	188	anti-parallel
Strand 4	I	194	197	anti-parallel
Strand 5	I	204	205	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	227	231	first strand
Strand 2	I	332	336	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	239	240	first strand
Strand 2	I	284	285	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	255	257	first strand
Strand 2	I	260	263	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	301	302	first strand
Strand 2	I	309	311	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	580	581	first strand
Strand 2	I	587	594	anti-parallel
Strand 3	I	599	607	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	580	581	first strand
Strand 2	I	587	594	anti-parallel
Strand 3	I	652	654	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	616	617	first strand
Strand 2	I	633	637	anti-parallel
Strand 3	I	642	646	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	749	752	first strand
Strand 2	I	731	736	anti-parallel
Strand 3	I	722	727	anti-parallel
Strand 4	I	776	777	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	757	758	first strand
Strand 2	I	764	765	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	768	769	first strand
Strand 2	I	784	785	anti-parallel

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There are 8 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1209	1210	first strand
Strand 2	I	1225	1234	anti-parallel
Strand 3	I	1065	1068	anti-parallel
Strand 4	I	1073	1080	anti-parallel
Strand 5	I	816	819	parallel
Strand 6	I	1096	1098	anti-parallel
Strand 7	I	798	804	parallel
Strand 8	I	1225	1234	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	830	839	first strand
Strand 2	I	1048	1058	anti-parallel
Strand 3	I	930	935	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	882	884	first strand
Strand 2	I	918	919	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1087	1088	first strand
Strand 2	I	1212	1213	anti-parallel

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There are 8 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1244	1246	first strand
Strand 2	J	350	356	anti-parallel
Strand 3	J	465	469	anti-parallel
Strand 4	J	421	425	anti-parallel
Strand 5	J	434	442	anti-parallel
Strand 6	J	365	369	parallel
Strand 7	J	447	448	anti-parallel
Strand 8	J	350	356	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1269	1270	first strand
Strand 2	J	345	346	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1335	1339	first strand
Strand 2	J	20	24	anti-parallel
Strand 3	J	1341	1342	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	103	112	first strand
Strand 2	J	238	244	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	144	145	first strand
Strand 2	J	159	160	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	526	527	first strand
Strand 2	J	548	552	parallel
Strand 3	J	568	572	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	555	556	first strand
Strand 2	J	564	565	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	707	708	first strand
Strand 2	J	713	714	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	809	811	first strand
Strand 2	J	894	895	parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	821	822	first strand
Strand 2	J	880	881	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	949	952	first strand
Strand 2	J	1015	1019	anti-parallel
Strand 3	J	1002	1003	anti-parallel
Strand 4	J	973	975	anti-parallel
Strand 5	J	965	967	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	957	961	first strand
Strand 2	J	981	985	anti-parallel
Strand 3	J	991	995	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1026	1028	first strand
Strand 2	J	1120	1123	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1034	1038	first strand
Strand 2	J	1077	1081	anti-parallel
Strand 3	J	1098	1100	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1046	1047	first strand
Strand 2	J	1059	1061	anti-parallel
Strand 3	J	1106	1107	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1187	1190	first strand
Strand 2	J	1173	1178	anti-parallel
Strand 3	J	1161	1164	anti-parallel
Strand 4	J	1203	1204	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1279	1281	first strand
Strand 2	J	1263	1266	anti-parallel
Strand 3	J	1302	1304	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8EH9

Analysis of interatomic Contacts of Structural Units in PDB entry:
8EH9