Analysis of interatomic Contacts of Structural Units in PDB entry:
8EHI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8EHI entry

There are 8 chains in PDB entry 8EHI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	C 2	A 31
B	T 2	G 31
R	G 10	U 19
G	PHE 8	PHE 231
H	VAL 5	GLU 235
I	VAL 2	ASP 1341
J	GLU 16	ARG 1373
K	ALA 2	LEU 80

There are100 helices in PDB entry 8EHI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	34	50	Right-handed alpha
Helix 2	AA2	G	77	87	Right-handed alpha
Helix 3	AA3	G	113	115	Right-handed 310
Helix 4	AA4	G	212	229	Right-handed alpha
Helix 5	AA5	H	34	50	Right-handed alpha
Helix 6	AA6	H	77	87	Right-handed alpha
Helix 7	AA7	H	113	115	Right-handed 310
Helix 8	AA8	H	212	228	Right-handed alpha
Helix 9	AA9	I	29	39	Right-handed alpha
Helix 10	AB1	I	48	57	Right-handed alpha
Helix 11	AB2	I	81	89	Right-handed alpha
Helix 12	AB3	I	206	213	Right-handed alpha
Helix 13	AB4	I	216	225	Right-handed alpha
Helix 14	AB5	I	242	247	Right-handed 310
Helix 15	AB6	I	270	281	Right-handed alpha
Helix 16	AB7	I	290	295	Right-handed 310
Helix 17	AB8	I	318	329	Right-handed alpha
Helix 18	AB9	I	345	354	Right-handed alpha
Helix 19	AC1	I	358	371	Right-handed alpha
Helix 20	AC2	I	377	390	Right-handed alpha
Helix 21	AC3	I	398	409	Right-handed alpha
Helix 22	AC4	I	421	438	Right-handed alpha
Helix 23	AC5	I	459	481	Right-handed alpha
Helix 24	AC6	I	495	508	Right-handed alpha
Helix 25	AC7	I	519	525	Right-handed alpha
Helix 26	AC8	I	551	555	Right-handed 310
Helix 27	AC9	I	670	674	Right-handed 310
Helix 28	AD1	I	675	688	Right-handed alpha
Helix 29	AD2	I	704	709	Right-handed alpha
Helix 30	AD3	I	738	741	Right-handed 310
Helix 31	AD4	I	820	825	Right-handed alpha
Helix 32	AD5	I	858	863	Right-handed alpha
Helix 33	AD6	I	942	948	Right-handed alpha
Helix 34	AD7	I	949	979	Right-handed alpha
Helix 35	AD8	I	1005	1037	Right-handed alpha
Helix 36	AD9	I	1081	1085	Right-handed 310
Helix 37	AE1	I	1101	1106	Right-handed alpha
Helix 38	AE2	I	1109	1134	Right-handed alpha
Helix 39	AE3	I	1137	1151	Right-handed alpha
Helix 40	AE4	I	1160	1164	Right-handed 310
Helix 41	AE5	I	1169	1176	Right-handed alpha
Helix 42	AE6	I	1191	1202	Right-handed alpha
Helix 43	AE7	I	1271	1282	Right-handed alpha
Helix 44	AE8	I	1283	1292	Right-handed alpha
Helix 45	AE9	I	1298	1309	Right-handed alpha
Helix 46	AF1	I	1320	1331	Right-handed alpha
Helix 47	AF2	J	26	34	Right-handed alpha
Helix 48	AF3	J	77	81	Right-handed 310
Helix 49	AF4	J	95	100	Right-handed 310
Helix 50	AF5	J	122	128	Right-handed alpha
Helix 51	AF6	J	131	140	Right-handed alpha
Helix 52	AF7	J	161	173	Right-handed alpha
Helix 53	AF8	J	180	191	Right-handed alpha
Helix 54	AF9	J	193	208	Right-handed alpha
Helix 55	AG1	J	210	230	Right-handed alpha
Helix 56	AG2	J	233	236	Right-handed 310
Helix 57	AG3	J	246	250	Right-handed 310
Helix 58	AG4	J	263	286	Right-handed alpha
Helix 59	AG5	J	288	308	Right-handed alpha
Helix 60	AG6	J	326	330	Right-handed 310
Helix 61	AG7	J	337	342	Right-handed alpha
Helix 62	AG8	J	372	377	Right-handed alpha
Helix 63	AG9	J	377	386	Right-handed alpha
Helix 64	AH1	J	393	403	Right-handed alpha
Helix 65	AH2	J	410	415	Right-handed alpha
Helix 66	AH3	J	430	432	Right-handed 310
Helix 67	AH4	J	453	458	Right-handed alpha
Helix 68	AH5	J	473	483	Right-handed alpha
Helix 69	AH6	J	505	514	Right-handed alpha
Helix 70	AH7	J	529	539	Right-handed alpha
Helix 71	AH8	J	574	579	Right-handed alpha
Helix 72	AH9	J	580	582	Right-handed 310
Helix 73	AI1	J	597	613	Right-handed alpha
Helix 74	AI2	J	614	634	Right-handed alpha
Helix 75	AI3	J	649	670	Right-handed alpha
Helix 76	AI4	J	674	703	Right-handed alpha
Helix 77	AI5	J	720	728	Right-handed alpha
Helix 78	AI6	J	733	741	Right-handed alpha
Helix 79	AI7	J	770	789	Right-handed alpha
Helix 80	AI8	J	789	805	Right-handed alpha
Helix 81	AI9	J	834	840	Right-handed alpha
Helix 82	AJ1	J	865	875	Right-handed alpha
Helix 83	AJ2	J	884	888	Right-handed 310
Helix 84	AJ3	J	914	925	Right-handed alpha
Helix 85	AJ4	J	926	930	Right-handed 310
Helix 86	AJ5	J	1068	1072	Right-handed 310
Helix 87	AJ6	J	1137	1146	Right-handed alpha
Helix 88	AJ7	J	1218	1225	Right-handed alpha
Helix 89	AJ8	J	1225	1244	Right-handed alpha
Helix 90	AJ9	J	1249	1261	Right-handed alpha
Helix 91	AK1	J	1282	1293	Right-handed alpha
Helix 92	AK2	J	1310	1315	Right-handed alpha
Helix 93	AK3	J	1320	1326	Right-handed alpha
Helix 94	AK4	J	1327	1338	Right-handed alpha
Helix 95	AK5	J	1347	1354	Right-handed alpha
Helix 96	AK6	J	1360	1372	Right-handed alpha
Helix 97	AK7	K	6	13	Right-handed alpha
Helix 98	AK8	K	17	32	Right-handed alpha
Helix 99	AK9	K	45	56	Right-handed alpha
Helix 100	AL1	K	60	80	Right-handed alpha

There are 44 sheets in PDB entry 8EHI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	12	16	first strand
Strand 2	G	23	31	anti-parallel
Strand 3	G	199	207	anti-parallel
Strand 4	G	180	187	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	97	105	first strand
Strand 2	G	139	149	anti-parallel
Strand 3	G	53	61	anti-parallel
Strand 4	G	171	172	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	108	111	first strand
Strand 2	G	129	133	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	151	153	first strand
Strand 2	G	175	177	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	12	15	first strand
Strand 2	H	23	31	anti-parallel
Strand 3	H	198	207	anti-parallel
Strand 4	H	180	185	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	18	19	first strand
Strand 2	H	23	31	anti-parallel
Strand 3	H	198	207	anti-parallel
Strand 4	H	188	190	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	97	101	first strand
Strand 2	H	142	150	anti-parallel
Strand 3	H	52	61	anti-parallel
Strand 4	H	171	172	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	90	91	first strand
Strand 2	H	122	123	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	104	105	first strand
Strand 2	H	139	140	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	108	111	first strand
Strand 2	H	129	133	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	152	153	first strand
Strand 2	H	175	176	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	13	14	first strand
Strand 2	I	1182	1183	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	59	60	first strand
Strand 2	I	66	75	anti-parallel
Strand 3	I	93	105	anti-parallel
Strand 4	I	114	128	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	136	137	first strand
Strand 2	I	142	145	anti-parallel
Strand 3	I	512	514	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	451	454	first strand
Strand 2	I	147	151	anti-parallel
Strand 3	I	530	531	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	154	158	first strand
Strand 2	I	173	177	anti-parallel
Strand 3	I	184	187	anti-parallel
Strand 4	I	195	198	anti-parallel
Strand 5	I	204	205	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	284	285	first strand
Strand 2	I	239	240	anti-parallel
Strand 3	I	227	231	anti-parallel
Strand 4	I	332	336	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	255	257	first strand
Strand 2	I	260	263	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	301	302	first strand
Strand 2	I	309	311	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	580	581	first strand
Strand 2	I	587	594	anti-parallel
Strand 3	I	599	606	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	580	581	first strand
Strand 2	I	587	594	anti-parallel
Strand 3	I	652	654	anti-parallel
Strand 4	I	616	617	parallel
Strand 5	I	633	637	anti-parallel
Strand 6	I	642	646	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	716	717	first strand
Strand 2	I	782	785	anti-parallel
Strand 3	I	768	769	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	749	751	first strand
Strand 2	I	731	736	anti-parallel
Strand 3	I	722	728	anti-parallel
Strand 4	I	776	777	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	757	758	first strand
Strand 2	I	764	765	anti-parallel

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There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1065	1066	first strand
Strand 2	I	1074	1080	anti-parallel
Strand 3	I	816	819	parallel
Strand 4	I	1096	1098	anti-parallel
Strand 5	I	798	804	parallel
Strand 6	I	1225	1232	anti-parallel
Strand 7	I	1209	1210	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	830	841	first strand
Strand 2	I	1046	1058	anti-parallel
Strand 3	I	927	935	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	882	884	first strand
Strand 2	I	918	919	anti-parallel

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There are 8 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1244	1246	first strand
Strand 2	J	350	356	anti-parallel
Strand 3	J	465	469	anti-parallel
Strand 4	J	421	425	anti-parallel
Strand 5	J	434	442	anti-parallel
Strand 6	J	365	369	parallel
Strand 7	J	446	449	anti-parallel
Strand 8	J	350	356	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1269	1270	first strand
Strand 2	J	345	346	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1335	1339	first strand
Strand 2	J	20	24	anti-parallel
Strand 3	J	1341	1342	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	103	112	first strand
Strand 2	J	238	244	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	159	160	first strand
Strand 2	J	144	146	anti-parallel
Strand 3	J	178	179	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	548	556	first strand
Strand 2	J	564	572	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	706	707	first strand
Strand 2	J	714	715	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	820	822	first strand
Strand 2	J	880	882	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	825	826	first strand
Strand 2	J	831	833	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	949	952	first strand
Strand 2	J	1015	1019	anti-parallel
Strand 3	J	1002	1003	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	957	961	first strand
Strand 2	J	981	985	anti-parallel
Strand 3	J	991	996	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	965	967	first strand
Strand 2	J	973	975	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1025	1026	first strand
Strand 2	J	1123	1124	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1034	1038	first strand
Strand 2	J	1077	1081	anti-parallel
Strand 3	J	1098	1100	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1046	1048	first strand
Strand 2	J	1059	1061	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1188	1190	first strand
Strand 2	J	1173	1178	anti-parallel
Strand 3	J	1161	1165	anti-parallel
Strand 4	J	1203	1204	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1279	1281	first strand
Strand 2	J	1263	1268	anti-parallel
Strand 3	J	1301	1304	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8EHI

Analysis of interatomic Contacts of Structural Units in PDB entry:
8EHI