Analysis of interatomic Contacts of Structural Units in PDB entry:
8EHO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EHO entry

There are 6 chains in PDB entry 8EHO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 413MET 576
B
 MET 1GLY 75
C
 PRO 412LEU 577
D
 MET 1GLY 75
E
 VAL 413THR 578
F
 MET 1GLY 75
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 8EHO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
428 444Right-handed alpha
Helix 2
AA2
A
456 460Right-handed 310
Helix 3
AA3
A
463 474Right-handed alpha
Helix 4
AA4
A
513 519Right-handed alpha
Helix 5
AA5
A
538 547Right-handed alpha
Helix 6
AA6
A
550 564Right-handed alpha
Helix 7
AA7
A
570 576Right-handed alpha
Helix 8
AA8
B
22 35Right-handed alpha
Helix 9
AA9
B
37 39Right-handed 310
Helix 10
AB1
B
56 60Right-handed 310
Helix 11
AB2
C
428 444Right-handed alpha
Helix 12
AB3
C
456 460Right-handed 310
Helix 13
AB4
C
463 474Right-handed alpha
Helix 14
AB5
C
513 519Right-handed alpha
Helix 15
AB6
C
538 547Right-handed alpha
Helix 16
AB7
C
550 564Right-handed alpha
Helix 17
AB8
C
570 576Right-handed alpha
Helix 18
AB9
D
22 35Right-handed alpha
Helix 19
AC1
D
37 39Right-handed 310
Helix 20
AC2
D
56 60Right-handed 310
Helix 21
AC3
E
428 444Right-handed alpha
Helix 22
AC4
E
456 460Right-handed 310
Helix 23
AC5
E
463 474Right-handed alpha
Helix 24
AC6
E
513 519Right-handed alpha
Helix 25
AC7
E
538 547Right-handed alpha
Helix 26
AC8
E
550 564Right-handed alpha
Helix 27
AC9
E
570 577Right-handed alpha
Helix 28
AD1
F
22 35Right-handed alpha
Helix 29
AD2
F
37 39Right-handed 310
Helix 30
AD3
F
56 60Right-handed 310
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There are 8 sheets in PDB entry 8EHO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
419 421first strand
Strand 2
A
498 503anti-parallel
Strand 3
A
490 495anti-parallel
Strand 4
A
477 479parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
461 462first strand
Strand 2
B
74 75anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 16first strand
Strand 2
B
2 6anti-parallel
Strand 3
B
66 71parallel
Strand 4
B
41 45anti-parallel
Strand 5
B
48 49anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
477 479first strand
Strand 2
C
490 495parallel
Strand 3
C
498 503anti-parallel
Strand 4
C
418 422anti-parallel
Strand 5
E
418 422anti-parallel
Strand 6
E
498 503anti-parallel
Strand 7
E
490 495anti-parallel
Strand 8
E
477 479parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
461 462first strand
Strand 2
D
74 75anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
12 16first strand
Strand 2
D
2 6anti-parallel
Strand 3
D
66 71parallel
Strand 4
D
41 45anti-parallel
Strand 5
D
48 49anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
461 462first strand
Strand 2
F
74 75anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
12 16first strand
Strand 2
F
2 6anti-parallel
Strand 3
F
66 71parallel
Strand 4
F
41 45anti-parallel
Strand 5
F
48 49anti-parallel
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