Analysis of interatomic Contacts of Structural Units in PDB entry:
8EI1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EI1 entry

There are 4 chains in PDB entry 8EI1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 196ASN 539
B
 ASP 196ASN 539
C
 ASP 196THR 532
D
 THR 195LEU 378
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 82 helices in PDB entry 8EI1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
196 212Right-handed alpha
Helix 2
AA2
A
218 233Right-handed alpha
Helix 3
AA3
A
234 252Right-handed alpha
Helix 4
AA4
A
253 258Right-handed 310
Helix 5
AA5
A
263 289Right-handed alpha
Helix 6
AA6
A
289 299Right-handed alpha
Helix 7
AA7
A
305 318Right-handed alpha
Helix 8
AA8
A
321 341Right-handed alpha
Helix 9
AA9
A
346 360Right-handed alpha
Helix 10
AB1
A
362 367Right-handed alpha
Helix 11
AB2
A
367 390Right-handed alpha
Helix 12
AB3
A
391 413Right-handed alpha
Helix 13
AB4
A
415 417Right-handed 310
Helix 14
AB5
A
418 431Right-handed alpha
Helix 15
AB6
A
434 449Right-handed alpha
Helix 16
AB7
A
451 464Right-handed alpha
Helix 17
AB8
A
467 488Right-handed alpha
Helix 18
AB9
A
496 515Right-handed alpha
Helix 19
AC1
A
519 534Right-handed alpha
Helix 20
AC2
A
535 537Right-handed 310
Helix 21
AC3
B
197 212Right-handed alpha
Helix 22
AC4
B
218 232Right-handed alpha
Helix 23
AC5
B
234 252Right-handed alpha
Helix 24
AC6
B
253 259Right-handed 310
Helix 25
AC7
B
263 289Right-handed alpha
Helix 26
AC8
B
289 299Right-handed alpha
Helix 27
AC9
B
305 318Right-handed alpha
Helix 28
AD1
B
321 341Right-handed alpha
Helix 29
AD2
B
346 360Right-handed alpha
Helix 30
AD3
B
362 367Right-handed alpha
Helix 31
AD4
B
367 390Right-handed alpha
Helix 32
AD5
B
391 413Right-handed alpha
Helix 33
AD6
B
415 417Right-handed 310
Helix 34
AD7
B
418 431Right-handed alpha
Helix 35
AD8
B
434 449Right-handed alpha
Helix 36
AD9
B
451 463Right-handed alpha
Helix 37
AE1
B
467 488Right-handed alpha
Helix 38
AE2
B
497 515Right-handed alpha
Helix 39
AE3
B
519 534Right-handed alpha
Helix 40
AE4
C
197 211Right-handed alpha
Helix 41
AE5
C
218 232Right-handed alpha
Helix 42
AE6
C
234 237Right-handed 310
Helix 43
AE7
C
238 252Right-handed alpha
Helix 44
AE8
C
253 259Right-handed 310
Helix 45
AE9
C
263 289Right-handed alpha
Helix 46
AF1
C
289 300Right-handed alpha
Helix 47
AF2
C
305 318Right-handed alpha
Helix 48
AF3
C
321 341Right-handed alpha
Helix 49
AF4
C
346 360Right-handed alpha
Helix 50
AF5
C
362 367Right-handed alpha
Helix 51
AF6
C
367 390Right-handed alpha
Helix 52
AF7
C
391 413Right-handed alpha
Helix 53
AF8
C
415 417Right-handed 310
Helix 54
AF9
C
418 431Right-handed alpha
Helix 55
AG1
C
434 449Right-handed alpha
Helix 56
AG2
C
451 463Right-handed alpha
Helix 57
AG3
C
467 488Right-handed alpha
Helix 58
AG4
C
496 515Right-handed alpha
Helix 59
AG5
C
519 531Right-handed alpha
Helix 60
AG6
D
196 211Right-handed alpha
Helix 61
AG7
D
218 232Right-handed alpha
Helix 62
AG8
D
237 252Right-handed alpha
Helix 63
AG9
D
253 259Right-handed 310
Helix 64
AH1
D
263 289Right-handed alpha
Helix 65
AH2
D
289 299Right-handed alpha
Helix 66
AH3
D
305 318Right-handed alpha
Helix 67
AH4
D
321 341Right-handed alpha
Helix 68
AH5
D
346 360Right-handed alpha
Helix 69
AH6
D
362 367Right-handed alpha
Helix 70
AH7
D
367 390Right-handed alpha
Helix 71
AH8
D
391 413Right-handed alpha
Helix 72
AH9
D
415 417Right-handed 310
Helix 73
AI1
D
418 431Right-handed alpha
Helix 74
AI2
D
434 449Right-handed alpha
Helix 75
AI3
D
451 463Right-handed alpha
Helix 76
AI4
D
467 488Right-handed alpha
Helix 77
AI5
D
496 515Right-handed alpha
Helix 78
AI6
D
519 531Right-handed alpha
Helix 79
AI7
E
1 17Right-handed alpha
Helix 80
AI8
F
1 17Right-handed alpha
Helix 81
AI9
G
5 16Right-handed alpha
Helix 82
AJ1
H
7 16Right-handed alpha
Back to top of page
There are no sheets in PDB entry 8EI1
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il