Analysis of interatomic Contacts of Structural Units in PDB entry:
8EI6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EI6 entry

There are 4 chains in PDB entry 8EI6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 492GLU 865
B
 ASP 492GLU 865
C
 PRO 2PHE 17
D
 PRO 2PHE 17
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 8EI6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
494 508Right-handed alpha
Helix 2
AA2
A
523 534Right-handed alpha
Helix 3
AA3
A
537 542Right-handed 310
Helix 4
AA4
A
555 571Right-handed alpha
Helix 5
AA5
A
572 577Right-handed 310
Helix 6
AA6
A
594 598Right-handed 310
Helix 7
AA7
A
600 618Right-handed alpha
Helix 8
AA8
A
627 635Right-handed alpha
Helix 9
AA9
A
640 648Right-handed alpha
Helix 10
AB1
A
648 660Right-handed alpha
Helix 11
AB2
A
697 715Right-handed alpha
Helix 12
AB3
A
717 732Right-handed alpha
Helix 13
AB4
A
733 738Right-handed 310
Helix 14
AB5
A
741 751Right-handed alpha
Helix 15
AB6
A
756 763Right-handed alpha
Helix 16
AB7
A
773 785Right-handed alpha
Helix 17
AB8
A
787 800Right-handed alpha
Helix 18
AB9
A
808 811Right-handed 310
Helix 19
AC1
A
849 864Right-handed alpha
Helix 20
AC2
B
494 508Right-handed alpha
Helix 21
AC3
B
523 535Right-handed alpha
Helix 22
AC4
B
536 542Right-handed 310
Helix 23
AC5
B
555 571Right-handed alpha
Helix 24
AC6
B
572 577Right-handed 310
Helix 25
AC7
B
584 586Right-handed 310
Helix 26
AC8
B
594 598Right-handed 310
Helix 27
AC9
B
600 618Right-handed alpha
Helix 28
AD1
B
627 635Right-handed alpha
Helix 29
AD2
B
640 648Right-handed alpha
Helix 30
AD3
B
648 661Right-handed alpha
Helix 31
AD4
B
700 714Right-handed alpha
Helix 32
AD5
B
717 730Right-handed alpha
Helix 33
AD6
B
733 738Right-handed 310
Helix 34
AD7
B
741 751Right-handed alpha
Helix 35
AD8
B
756 763Right-handed alpha
Helix 36
AD9
B
773 786Right-handed alpha
Helix 37
AE1
B
787 800Right-handed alpha
Helix 38
AE2
B
808 811Right-handed 310
Helix 39
AE3
B
849 864Right-handed alpha
Helix 40
AE4
C
5 17Right-handed alpha
Helix 41
AE5
D
5 17Right-handed alpha
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There are 9 sheets in PDB entry 8EI6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
514 518first strand
Strand 2
A
543 547parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
579 583first strand
Strand 2
A
587 591anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
673 678first strand
Strand 2
A
681 686anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
764 767first strand
Strand 2
A
821 825parallel
Strand 3
A
841 844parallel
Strand 4
A
834 836anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
813 814first strand
Strand 2
A
817 818anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
514 519first strand
Strand 2
B
543 548parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
579 583first strand
Strand 2
B
587 591anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
765 767first strand
Strand 2
B
822 825parallel
Strand 3
B
841 844parallel
Strand 4
B
834 836anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
813 814first strand
Strand 2
B
817 818anti-parallel
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