Analysis of interatomic Contacts of Structural Units in PDB entry:
8EI9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EI9 entry

There are 3 chains in PDB entry 8EI9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ALA 5GLN 21
A
 LEU 148ASP 665
B
 GLU 25VAL 110
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 8EI9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
6 17Right-handed alpha
Helix 2
AA2
A
152 160Right-handed alpha
Helix 3
AA3
A
168 179Right-handed alpha
Helix 4
AA4
A
181 190Right-handed alpha
Helix 5
AA5
A
191 203Right-handed alpha
Helix 6
AA6
A
208 223Right-handed alpha
Helix 7
AA7
A
225 234Right-handed alpha
Helix 8
AA8
A
236 241Right-handed alpha
Helix 9
AA9
A
242 245Right-handed 310
Helix 10
AB1
A
248 266Right-handed alpha
Helix 11
AB2
A
268 276Right-handed alpha
Helix 12
AB3
A
277 285Right-handed alpha
Helix 13
AB4
A
291 305Right-handed alpha
Helix 14
AB5
A
308 318Right-handed alpha
Helix 15
AB6
A
320 329Right-handed alpha
Helix 16
AB7
A
333 346Right-handed alpha
Helix 17
AB8
A
353 361Right-handed alpha
Helix 18
AB9
A
361 367Right-handed alpha
Helix 19
AC1
A
368 372Right-handed 310
Helix 20
AC2
A
374 389Right-handed alpha
Helix 21
AC3
A
398 409Right-handed alpha
Helix 22
AC4
A
413 427Right-handed alpha
Helix 23
AC5
A
431 441Right-handed alpha
Helix 24
AC6
A
442 455Right-handed alpha
Helix 25
AC7
A
457 472Right-handed alpha
Helix 26
AC8
A
477 488Right-handed alpha
Helix 27
AC9
A
490 497Right-handed alpha
Helix 28
AD1
A
503 518Right-handed alpha
Helix 29
AD2
A
520 522Right-handed 310
Helix 30
AD3
A
523 530Right-handed alpha
Helix 31
AD4
A
532 548Right-handed alpha
Helix 32
AD5
A
566 581Right-handed alpha
Helix 33
AD6
A
583 593Right-handed alpha
Helix 34
AD7
A
595 603Right-handed alpha
Helix 35
AD8
A
609 618Right-handed alpha
Helix 36
AD9
A
624 632Right-handed alpha
Helix 37
AE1
A
648 653Right-handed alpha
Helix 38
AE2
A
654 662Right-handed alpha
Helix 39
AE3
B
31 42Right-handed alpha
Helix 40
AE4
B
49 65Right-handed alpha
Helix 41
AE5
B
81 86Right-handed alpha
Helix 42
AE6
B
96 104Right-handed alpha
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There are 2 sheets in PDB entry 8EI9. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 30first strand
Strand 2
B
107 109anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 76first strand
Strand 2
B
90 92anti-parallel
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