Analysis of interatomic Contacts of Structural Units in PDB entry:
8EIB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EIB entry

There are 3 chains in PDB entry 8EIB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 157PHE 660
B
 GLU 25VAL 110
C
 ILE 7THR 21
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 8EIB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
167 179Right-handed alpha
Helix 2
AA2
A
191 198Right-handed alpha
Helix 3
AA3
A
199 204Right-handed alpha
Helix 4
AA4
A
208 222Right-handed alpha
Helix 5
AA5
A
226 234Right-handed alpha
Helix 6
AA6
A
241 245Right-handed 310
Helix 7
AA7
A
248 262Right-handed alpha
Helix 8
AA8
A
268 277Right-handed alpha
Helix 9
AA9
A
278 283Right-handed alpha
Helix 10
AB1
A
284 286Right-handed 310
Helix 11
AB2
A
290 306Right-handed alpha
Helix 12
AB3
A
308 318Right-handed alpha
Helix 13
AB4
A
319 331Right-handed alpha
Helix 14
AB5
A
333 347Right-handed alpha
Helix 15
AB6
A
354 359Right-handed alpha
Helix 16
AB7
A
362 367Right-handed alpha
Helix 17
AB8
A
374 389Right-handed alpha
Helix 18
AB9
A
398 408Right-handed alpha
Helix 19
AC1
A
413 426Right-handed alpha
Helix 20
AC2
A
433 437Right-handed 310
Helix 21
AC3
A
442 447Right-handed alpha
Helix 22
AC4
A
447 455Right-handed alpha
Helix 23
AC5
A
457 472Right-handed alpha
Helix 24
AC6
A
475 477Right-handed 310
Helix 25
AC7
A
478 484Right-handed alpha
Helix 26
AC8
A
489 496Right-handed alpha
Helix 27
AC9
A
503 518Right-handed alpha
Helix 28
AD1
A
519 522Right-handed 310
Helix 29
AD2
A
523 530Right-handed alpha
Helix 30
AD3
A
532 549Right-handed alpha
Helix 31
AD4
A
566 581Right-handed alpha
Helix 32
AD5
A
583 592Right-handed alpha
Helix 33
AD6
A
595 601Right-handed alpha
Helix 34
AD7
A
607 623Right-handed alpha
Helix 35
AD8
A
624 633Right-handed alpha
Helix 36
AD9
A
638 643Right-handed alpha
Helix 37
AE1
A
648 660Right-handed alpha
Helix 38
AE2
B
31 40Right-handed alpha
Helix 39
AE3
B
51 64Right-handed alpha
Helix 40
AE4
B
81 86Right-handed alpha
Helix 41
AE5
B
95 106Right-handed alpha
Helix 42
AE6
C
8 17Right-handed alpha
Helix 43
AE7
C
18 20Right-handed 310
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There are 2 sheets in PDB entry 8EIB. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 28first strand
Strand 2
B
48 49anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 76first strand
Strand 2
B
90 92anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il