Analysis of interatomic Contacts of Structural Units in PDB entry:
8EIH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8EIH entry

There are 5 chains in PDB entry 8EIH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 414	GLU 853
B	ASP 414	GLU 853
C	GLN 415	GLU 853
D	ASP 433	GLU 853
E	GLU 216	PRO 350

There are 68 helices in PDB entry 8EIH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	416	426	Right-handed alpha
Helix 2	AA2	A	430	434	Right-handed 310
Helix 3	AA3	A	455	466	Right-handed alpha
Helix 4	AA4	A	501	506	Right-handed alpha
Helix 5	AA5	A	512	518	Right-handed alpha
Helix 6	AA6	A	541	552	Right-handed alpha
Helix 7	AA7	A	585	595	Right-handed alpha
Helix 8	AA8	A	607	618	Right-handed alpha
Helix 9	AA9	A	627	631	Right-handed 310
Helix 10	AB1	A	632	640	Right-handed alpha
Helix 11	AB2	A	666	670	Right-handed 310
Helix 12	AB3	A	671	682	Right-handed alpha
Helix 13	AB4	A	703	715	Right-handed alpha
Helix 14	AB5	A	724	726	Right-handed 310
Helix 15	AB6	A	755	760	Right-handed 310
Helix 16	AB7	A	801	810	Right-handed alpha
Helix 17	AB8	A	822	832	Right-handed alpha
Helix 18	AB9	A	835	844	Right-handed alpha
Helix 19	AC1	A	845	849	Right-handed 310
Helix 20	AC2	B	416	426	Right-handed alpha
Helix 21	AC3	B	430	434	Right-handed 310
Helix 22	AC4	B	455	466	Right-handed alpha
Helix 23	AC5	B	501	506	Right-handed alpha
Helix 24	AC6	B	511	519	Right-handed alpha
Helix 25	AC7	B	541	552	Right-handed alpha
Helix 26	AC8	B	585	594	Right-handed alpha
Helix 27	AC9	B	607	618	Right-handed alpha
Helix 28	AD1	B	627	631	Right-handed 310
Helix 29	AD2	B	632	640	Right-handed alpha
Helix 30	AD3	B	666	670	Right-handed 310
Helix 31	AD4	B	671	683	Right-handed alpha
Helix 32	AD5	B	703	715	Right-handed alpha
Helix 33	AD6	B	724	726	Right-handed 310
Helix 34	AD7	B	755	760	Right-handed 310
Helix 35	AD8	B	801	810	Right-handed alpha
Helix 36	AD9	B	822	832	Right-handed alpha
Helix 37	AE1	B	835	844	Right-handed alpha
Helix 38	AE2	B	845	849	Right-handed 310
Helix 39	AE3	C	416	427	Right-handed alpha
Helix 40	AE4	C	430	434	Right-handed 310
Helix 41	AE5	C	455	466	Right-handed alpha
Helix 42	AE6	C	502	507	Right-handed alpha
Helix 43	AE7	C	511	518	Right-handed alpha
Helix 44	AE8	C	544	551	Right-handed alpha
Helix 45	AE9	C	568	572	Right-handed 310
Helix 46	AF1	C	585	594	Right-handed alpha
Helix 47	AF2	C	627	631	Right-handed 310
Helix 48	AF3	C	632	640	Right-handed alpha
Helix 49	AF4	C	661	667	Right-handed alpha
Helix 50	AF5	C	668	683	Right-handed alpha
Helix 51	AF6	C	703	715	Right-handed alpha
Helix 52	AF7	C	836	844	Right-handed alpha
Helix 53	AF8	C	845	849	Right-handed 310
Helix 54	AF9	D	455	463	Right-handed alpha
Helix 55	AG1	D	542	550	Right-handed alpha
Helix 56	AG2	D	585	593	Right-handed alpha
Helix 57	AG3	D	627	631	Right-handed 310
Helix 58	AG4	D	632	640	Right-handed alpha
Helix 59	AG5	D	668	683	Right-handed alpha
Helix 60	AG6	D	703	715	Right-handed alpha
Helix 61	AG7	D	724	726	Right-handed 310
Helix 62	AG8	D	836	844	Right-handed alpha
Helix 63	AG9	D	845	849	Right-handed 310
Helix 64	AH1	E	283	287	Right-handed 310
Helix 65	AH2	E	288	295	Right-handed alpha
Helix 66	AH3	E	295	313	Right-handed alpha
Helix 67	AH4	E	329	338	Right-handed alpha
Helix 68	AH5	E	345	349	Right-handed 310

There are 14 sheets in PDB entry 8EIH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	445	446	first strand
Strand 2	A	453	454	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	487	489	first strand
Strand 2	A	498	500	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	623	625	first strand
Strand 2	A	598	604	parallel
Strand 3	A	575	580	parallel
Strand 4	A	644	648	parallel
Strand 5	A	693	699	parallel
Strand 6	A	732	737	anti-parallel
Strand 7	A	719	722	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	765	766	first strand
Strand 2	A	791	793	anti-parallel
Strand 3	A	796	798	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	446	first strand
Strand 2	B	453	454	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	487	489	first strand
Strand 2	B	498	500	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	623	625	first strand
Strand 2	B	598	604	parallel
Strand 3	B	575	580	parallel
Strand 4	B	644	648	parallel
Strand 5	B	693	699	parallel
Strand 6	B	732	737	anti-parallel
Strand 7	B	719	722	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	765	766	first strand
Strand 2	B	791	793	anti-parallel
Strand 3	B	796	798	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	445	446	first strand
Strand 2	C	453	454	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	488	489	first strand
Strand 2	C	498	499	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	622	624	first strand
Strand 2	C	601	603	parallel
Strand 3	C	577	580	parallel
Strand 4	C	644	647	parallel
Strand 5	C	693	699	parallel
Strand 6	C	733	737	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	445	446	first strand
Strand 2	D	453	454	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	622	624	first strand
Strand 2	D	598	603	parallel
Strand 3	D	575	579	parallel
Strand 4	D	644	646	parallel
Strand 5	D	693	699	parallel
Strand 6	D	732	737	anti-parallel
Strand 7	D	719	722	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	228	229	first strand
Strand 2	E	241	243	anti-parallel
Strand 3	E	258	263	anti-parallel
Strand 4	E	269	273	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8EIH

Analysis of interatomic Contacts of Structural Units in PDB entry:
8EIH