Analysis of interatomic Contacts of Structural Units in PDB entry:
8EL8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EL8 entry


Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 4 chains in PDB entry 8EL8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 44LEU 381
B
 ASP 2TYR 467
B
 GLU 469ASP 472
B
 ASP 474GLU 493
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 8EL8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
252 265Right-handed alpha
Helix 2
AA2
A
280 291Right-handed alpha
Helix 3
AA3
A
294 298Right-handed 310
Helix 4
AA4
A
299 303Right-handed 310
Helix 5
AA5
A
318 338Right-handed alpha
Helix 6
AA6
A
365 378Right-handed alpha
Helix 7
AA7
B
3 13Right-handed alpha
Helix 8
AA8
B
14 29Right-handed alpha
Helix 9
AA9
B
36 38Right-handed 310
Helix 10
AB1
B
39 54Right-handed alpha
Helix 11
AB2
B
59 74Right-handed alpha
Helix 12
AB3
B
80 84Right-handed 310
Helix 13
AB4
B
85 97Right-handed alpha
Helix 14
AB5
B
110 128Right-handed alpha
Helix 15
AB6
B
129 139Right-handed alpha
Helix 16
AB7
B
139 150Right-handed alpha
Helix 17
AB8
B
157 175Right-handed alpha
Helix 18
AB9
B
176 185Right-handed alpha
Helix 19
AC1
B
187 201Right-handed alpha
Helix 20
AC2
B
220 238Right-handed alpha
Helix 21
AC3
B
249 264Right-handed alpha
Helix 22
AC4
B
270 286Right-handed alpha
Helix 23
AC5
B
289 298Right-handed 310
Helix 24
AC6
B
339 355Right-handed alpha
Helix 25
AC7
B
359 377Right-handed alpha
Helix 26
AC8
B
378 389Right-handed alpha
Helix 27
AC9
B
404 412Right-handed alpha
Helix 28
AD1
B
417 432Right-handed alpha
Helix 29
AD2
B
435 443Right-handed alpha
Helix 30
AD3
B
444 455Right-handed alpha
Helix 31
AD4
B
475 482Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8EL8.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 210first strand
Strand 2
A
45 47parallel
Strand 3
A
230 234parallel
Strand 4
A
273 278parallel
Strand 5
A
346 350parallel
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