Analysis of interatomic Contacts of Structural Units in PDB entry:
8ENK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ENK entry

There are 5 chains in PDB entry 8ENK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 46ILE 424
B
SER 44ILE 424
E
GLU 123LEU 175
M
U 1 U 6
N
U 2 U 6
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 8ENK. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
47 51Right-handed 310
Helix 2
AA2
A
53 63Right-handed alpha
Helix 3
AA3
A
69 81Right-handed alpha
Helix 4
AA4
A
94 107Right-handed alpha
Helix 5
AA5
A
122 137Right-handed alpha
Helix 6
AA6
A
153 164Right-handed alpha
Helix 7
AA7
A
172 182Right-handed alpha
Helix 8
AA8
A
197 204Right-handed alpha
Helix 9
AA9
A
204 217Right-handed alpha
Helix 10
AB1
A
235 241Right-handed alpha
Helix 11
AB2
A
253 258Right-handed 310
Helix 12
AB3
A
270 285Right-handed alpha
Helix 13
AB4
A
296 310Right-handed alpha
Helix 14
AB5
A
322 335Right-handed alpha
Helix 15
AB6
A
345 348Right-handed 310
Helix 16
AB7
A
367 376Right-handed alpha
Helix 17
AB8
A
377 378Right-handed 310
Helix 18
AB9
A
379 383Right-handed 310
Helix 19
AC1
A
393 408Right-handed alpha
Helix 20
AC2
B
46 51Right-handed 310
Helix 21
AC3
B
53 63Right-handed alpha
Helix 22
AC4
B
69 80Right-handed alpha
Helix 23
AC5
B
94 107Right-handed alpha
Helix 24
AC6
B
122 137Right-handed alpha
Helix 25
AC7
B
153 164Right-handed alpha
Helix 26
AC8
B
172 182Right-handed alpha
Helix 27
AC9
B
197 204Right-handed alpha
Helix 28
AD1
B
204 217Right-handed alpha
Helix 29
AD2
B
235 241Right-handed alpha
Helix 30
AD3
B
253 257Right-handed 310
Helix 31
AD4
B
270 285Right-handed alpha
Helix 32
AD5
B
296 310Right-handed alpha
Helix 33
AD6
B
322 335Right-handed alpha
Helix 34
AD7
B
345 348Right-handed 310
Helix 35
AD8
B
367 376Right-handed alpha
Helix 36
AD9
B
377 378Right-handed 310
Helix 37
AE1
B
379 383Right-handed 310
Helix 38
AE2
B
393 408Right-handed alpha
Helix 39
AE3
E
124 143Right-handed alpha
Helix 40
AE4
E
146 163Right-handed alpha
Helix 41
AE5
E
169 175Right-handed 310
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There are 4 sheets in PDB entry 8ENK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
145 148first strand
Strand 2
A
168 171parallel
Strand 3
A
116 119parallel
Strand 4
A
192 196parallel
Strand 5
A
223 228parallel
Strand 6
A
85 88parallel
Strand 7
A
247 249parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
314 317first strand
Strand 2
A
340 343parallel
Strand 3
A
289 293parallel
Strand 4
A
356 361parallel
Strand 5
A
385 391parallel
Strand 6
A
262 268parallel
Strand 7
A
412 413parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
145 148first strand
Strand 2
B
168 171parallel
Strand 3
B
116 119parallel
Strand 4
B
192 196parallel
Strand 5
B
223 228parallel
Strand 6
B
85 88parallel
Strand 7
B
247 249parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
314 317first strand
Strand 2
B
340 343parallel
Strand 3
B
289 293parallel
Strand 4
B
356 361parallel
Strand 5
B
385 391parallel
Strand 6
B
262 268parallel
Strand 7
B
412 413parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il