Analysis of interatomic Contacts of Structural Units in PDB entry:
8EOL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EOL entry

There are 2 chains in PDB entry 8EOL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2PRO 320
B
 THR 3LYS 322
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 8EOL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 40Right-handed alpha
Helix 2
AA2
A
55 68Right-handed alpha
Helix 3
AA3
A
75 81Right-handed alpha
Helix 4
AA4
A
102 115Right-handed alpha
Helix 5
AA5
A
128 133Right-handed 310
Helix 6
AA6
A
151 170Right-handed alpha
Helix 7
AA7
A
171 191Right-handed alpha
Helix 8
AA8
A
196 201Right-handed 310
Helix 9
AA9
A
212 230Right-handed alpha
Helix 10
AB1
A
264 279Right-handed alpha
Helix 11
AB2
A
296 316Right-handed alpha
Helix 12
AB3
B
5 40Right-handed alpha
Helix 13
AB4
B
55 68Right-handed alpha
Helix 14
AB5
B
75 81Right-handed alpha
Helix 15
AB6
B
102 115Right-handed alpha
Helix 16
AB7
B
128 133Right-handed 310
Helix 17
AB8
B
151 170Right-handed alpha
Helix 18
AB9
B
171 180Right-handed alpha
Helix 19
AC1
B
180 191Right-handed alpha
Helix 20
AC2
B
196 201Right-handed 310
Helix 21
AC3
B
212 230Right-handed alpha
Helix 22
AC4
B
264 278Right-handed alpha
Helix 23
AC5
B
296 316Right-handed alpha
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There are 4 sheets in PDB entry 8EOL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 73first strand
Strand 2
A
44 47parallel
Strand 3
A
92 97parallel
Strand 4
A
118 123parallel
Strand 5
A
136 139parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 237first strand
Strand 2
A
205 210parallel
Strand 3
A
255 258parallel
Strand 4
A
282 285parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 73first strand
Strand 2
B
44 47parallel
Strand 3
B
92 97parallel
Strand 4
B
118 123parallel
Strand 5
B
136 139parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
232 237first strand
Strand 2
B
205 210parallel
Strand 3
B
254 258parallel
Strand 4
B
281 285parallel
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