Analysis of interatomic Contacts of Structural Units in PDB entry:
8EOP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EOP entry

There is 1 chain in PDB entry 8EOP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2GLN 2104
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 79 helices in PDB entry 8EOP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 21Right-handed alpha
Helix 2
AA2
A
21 31Right-handed alpha
Helix 3
AA3
A
33 45Right-handed alpha
Helix 4
AA4
A
62 65Right-handed 310
Helix 5
AA5
A
66 76Right-handed alpha
Helix 6
AA6
A
86 90Right-handed 310
Helix 7
AA7
A
100 116Right-handed alpha
Helix 8
AA8
A
116 126Right-handed alpha
Helix 9
AA9
A
183 194Right-handed alpha
Helix 10
AB1
A
198 208Right-handed alpha
Helix 11
AB2
A
215 225Right-handed alpha
Helix 12
AB3
A
265 275Right-handed alpha
Helix 13
AB4
A
277 292Right-handed alpha
Helix 14
AB5
A
301 312Right-handed alpha
Helix 15
AB6
A
312 318Right-handed alpha
Helix 16
AB7
A
319 340Right-handed alpha
Helix 17
AB8
A
342 354Right-handed alpha
Helix 18
AB9
A
373 378Right-handed alpha
Helix 19
AC1
A
387 407Right-handed alpha
Helix 20
AC2
A
417 429Right-handed alpha
Helix 21
AC3
A
430 432Right-handed 310
Helix 22
AC4
A
496 502Right-handed alpha
Helix 23
AC5
A
502 520Right-handed alpha
Helix 24
AC6
A
540 558Right-handed alpha
Helix 25
AC7
A
559 575Right-handed alpha
Helix 26
AC8
A
576 584Right-handed alpha
Helix 27
AC9
A
587 617Right-handed alpha
Helix 28
AD1
A
624 647Right-handed alpha
Helix 29
AD2
A
652 659Right-handed alpha
Helix 30
AD3
A
661 666Right-handed alpha
Helix 31
AD4
A
668 677Right-handed alpha
Helix 32
AD5
A
682 690Right-handed alpha
Helix 33
AD6
A
692 710Right-handed alpha
Helix 34
AD7
A
732 755Right-handed alpha
Helix 35
AD8
A
846 855Right-handed alpha
Helix 36
AD9
A
879 881Right-handed 310
Helix 37
AE1
A
897 910Right-handed alpha
Helix 38
AE2
A
916 928Right-handed alpha
Helix 39
AE3
A
936 940Right-handed 310
Helix 40
AE4
A
941 955Right-handed alpha
Helix 41
AE5
A
971 985Right-handed alpha
Helix 42
AE6
A
997 1005Right-handed alpha
Helix 43
AE7
A
1021 1027Right-handed alpha
Helix 44
AE8
A
1140 1151Right-handed alpha
Helix 45
AE9
A
1213 1235Right-handed alpha
Helix 46
AF1
A
1235 1244Right-handed alpha
Helix 47
AF2
A
1244 1259Right-handed alpha
Helix 48
AF3
A
1272 1276Right-handed 310
Helix 49
AF4
A
1290 1305Right-handed alpha
Helix 50
AF5
A
1310 1314Right-handed 310
Helix 51
AF6
A
1324 1334Right-handed alpha
Helix 52
AF7
A
1388 1402Right-handed alpha
Helix 53
AF8
A
1428 1441Right-handed alpha
Helix 54
AF9
A
1449 1466Right-handed alpha
Helix 55
AG1
A
1482 1499Right-handed alpha
Helix 56
AG2
A
1533 1549Right-handed alpha
Helix 57
AG3
A
1550 1552Right-handed 310
Helix 58
AG4
A
1553 1563Right-handed alpha
Helix 59
AG5
A
1565 1573Right-handed alpha
Helix 60
AG6
A
1575 1605Right-handed alpha
Helix 61
AG7
A
1615 1631Right-handed alpha
Helix 62
AG8
A
1632 1634Right-handed 310
Helix 63
AG9
A
1635 1639Right-handed 310
Helix 64
AH1
A
1643 1671Right-handed alpha
Helix 65
AH2
A
1676 1688Right-handed alpha
Helix 66
AH3
A
1693 1698Right-handed alpha
Helix 67
AH4
A
1698 1717Right-handed alpha
Helix 68
AH5
A
1730 1753Right-handed alpha
Helix 69
AH6
A
1774 1786Right-handed alpha
Helix 70
AH7
A
1832 1842Right-handed alpha
Helix 71
AH8
A
1861 1868Right-handed alpha
Helix 72
AH9
A
1883 1896Right-handed alpha
Helix 73
AI1
A
1898 1900Right-handed 310
Helix 74
AI2
A
1901 1913Right-handed alpha
Helix 75
AI3
A
1922 1926Right-handed 310
Helix 76
AI4
A
1927 1941Right-handed alpha
Helix 77
AI5
A
1957 1975Right-handed alpha
Helix 78
AI6
A
2008 2016Right-handed alpha
Helix 79
AI7
A
2094 2104Right-handed alpha
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There are 10 sheets in PDB entry 8EOP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 51first strand
Strand 2
A
537 539anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 60first strand
Strand 2
A
528 531anti-parallel
Strand 3
A
1472 1475parallel
Strand 4
A
1415 1420anti-parallel
Strand 5
A
1284 1286parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
439 441first strand
Strand 2
A
463 465anti-parallel
Strand 3
A
1511 1512parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
807 813first strand
Strand 2
A
862 867anti-parallel
Strand 3
A
870 871anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
883 884first strand
Strand 2
A
960 962parallel
Strand 3
A
991 994parallel
Strand 4
A
837 840parallel
Strand 5
A
1007 1012parallel
Strand 6
A
1015 1020anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1372 1373first strand
Strand 2
A
1378 1379anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1814 1817first strand
Strand 2
A
1793 1799anti-parallel
Strand 3
A
1848 1853anti-parallel
Strand 4
A
1856 1857anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1822 1823first strand
Strand 2
A
1978 1979parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1870 1872first strand
Strand 2
A
1947 1949parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1998 1999first strand
Strand 2
A
2002 2003anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il