Analysis of interatomic Contacts of Structural Units in PDB entry:
8ERW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ERW entry

There are 2 chains in PDB entry 8ERW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 7LYS 272
B
 LYS 8LYS 272
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 8ERW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 19Right-handed alpha
Helix 2
AA2
A
28 36Right-handed alpha
Helix 3
AA3
A
37 54Right-handed alpha
Helix 4
AA4
A
58 70Right-handed alpha
Helix 5
AA5
A
71 89Right-handed alpha
Helix 6
AA6
A
90 104Right-handed alpha
Helix 7
AA7
A
105 123Right-handed alpha
Helix 8
AA8
A
124 138Right-handed alpha
Helix 9
AA9
A
139 157Right-handed alpha
Helix 10
AB1
A
158 172Right-handed alpha
Helix 11
AB2
A
173 189Right-handed alpha
Helix 12
AB3
A
192 206Right-handed alpha
Helix 13
AB4
A
207 225Right-handed alpha
Helix 14
AB5
A
226 240Right-handed alpha
Helix 15
AB6
A
241 259Right-handed alpha
Helix 16
AB7
A
260 272Right-handed alpha
Helix 17
AB8
B
9 19Right-handed alpha
Helix 18
AB9
B
37 53Right-handed alpha
Helix 19
AC1
B
57 70Right-handed alpha
Helix 20
AC2
B
71 89Right-handed alpha
Helix 21
AC3
B
90 104Right-handed alpha
Helix 22
AC4
B
105 123Right-handed alpha
Helix 23
AC5
B
124 138Right-handed alpha
Helix 24
AC6
B
139 157Right-handed alpha
Helix 25
AC7
B
158 172Right-handed alpha
Helix 26
AC8
B
173 189Right-handed alpha
Helix 27
AC9
B
192 206Right-handed alpha
Helix 28
AD1
B
207 225Right-handed alpha
Helix 29
AD2
B
226 240Right-handed alpha
Helix 30
AD3
B
241 257Right-handed alpha
Helix 31
AD4
B
261 272Right-handed alpha
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There are no sheets in PDB entry 8ERW
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il