Analysis of interatomic Contacts of Structural Units in PDB entry:
8ES7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ES7 entry

There are 8 chains in PDB entry 8ES7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
Z
 GLN 22ARG 57
Y
 GLY 25PHE 55
D
 PHE 22HIS 128
F
 GLN 33LYS 156
G
 GLN 23GLY 138
E
 GLN 33ARG 155
A
 GLN 2SER 257
B
 LYS 3LYS 289
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 8ES7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
Z
29 57Right-handed alpha
Helix 2
AA2
Y
28 55Right-handed alpha
Helix 3
AA3
D
100 128Right-handed alpha
Helix 4
AA4
F
88 93Right-handed alpha
Helix 5
AA5
F
104 108Right-handed 310
Helix 6
AA6
F
126 156Right-handed alpha
Helix 7
AA7
G
78 80Right-handed 310
Helix 8
AA8
G
111 136Right-handed alpha
Helix 9
AA9
E
88 93Right-handed alpha
Helix 10
AB1
E
126 155Right-handed alpha
Helix 11
AB2
A
83 87Right-handed 310
Helix 12
AB3
A
192 196Right-handed 310
Helix 13
AB4
A
213 220Right-handed alpha
Helix 14
AB5
A
224 255Right-handed alpha
Helix 15
AB6
B
82 86Right-handed 310
Helix 16
AB7
B
116 120Right-handed 310
Helix 17
AB8
B
131 139Right-handed alpha
Helix 18
AB9
B
198 202Right-handed alpha
Helix 19
AC1
B
248 289Right-handed alpha
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There are 21 sheets in PDB entry 8ES7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
26 27first strand
Strand 2
D
32 36anti-parallel
Strand 3
D
57 62anti-parallel
Strand 4
D
50 51anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
42 46first strand
Strand 2
D
69 73anti-parallel
Strand 3
D
84 91anti-parallel
Strand 4
E
110 116parallel
Strand 5
E
94 100anti-parallel
Strand 6
E
57 61anti-parallel
Strand 7
E
65 66anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
96 98first strand
Strand 2
E
122 124anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
37 41first strand
Strand 2
F
44 48anti-parallel
Strand 3
F
81 84anti-parallel
Strand 4
F
75 78anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
64 66first strand
Strand 2
F
57 61anti-parallel
Strand 3
F
94 100anti-parallel
Strand 4
F
111 116anti-parallel
Strand 5
G
97 102parallel
Strand 6
G
83 88anti-parallel
Strand 7
G
53 57anti-parallel
Strand 8
G
60 65anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
122 124first strand
Strand 2
G
107 109anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
31 34first strand
Strand 2
G
41 46anti-parallel
Strand 3
G
71 76anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
37 41first strand
Strand 2
E
44 48anti-parallel
Strand 3
E
81 85anti-parallel
Strand 4
E
75 78anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 5first strand
Strand 2
A
24 26anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 14first strand
Strand 2
A
111 116parallel
Strand 3
A
89 94anti-parallel
Strand 4
A
33 39anti-parallel
Strand 5
A
46 52anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 14first strand
Strand 2
A
111 116parallel
Strand 3
A
89 94anti-parallel
Strand 4
A
106 107anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 21first strand
Strand 2
A
74 79anti-parallel
Strand 3
A
64 69anti-parallel
Strand 4
A
60 61anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 128first strand
Strand 2
A
138 143anti-parallel
Strand 3
A
174 183anti-parallel
Strand 4
A
159 161anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 128first strand
Strand 2
A
138 143anti-parallel
Strand 3
A
174 183anti-parallel
Strand 4
A
165 169anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 6first strand
Strand 2
B
23 25anti-parallel
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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 14first strand
Strand 2
B
109 114parallel
Strand 3
B
87 94anti-parallel
Strand 4
B
31 38anti-parallel
Strand 5
B
42 49anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 14first strand
Strand 2
B
109 114parallel
Strand 3
B
87 94anti-parallel
Strand 4
B
104 105anti-parallel
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 21first strand
Strand 2
B
75 78anti-parallel
Strand 3
B
65 67anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 128first strand
Strand 2
B
140 150anti-parallel
Strand 3
B
188 197anti-parallel
Strand 4
B
170 172anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 128first strand
Strand 2
B
140 150anti-parallel
Strand 3
B
188 197anti-parallel
Strand 4
B
177 178anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 165first strand
Strand 2
B
155 161anti-parallel
Strand 3
B
207 214anti-parallel
Strand 4
B
233 240anti-parallel
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