Analysis of interatomic Contacts of Structural Units in PDB entry:
8ESF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ESF entry

There are 2 chains in PDB entry 8ESF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 14ALA 459
B
 PRO 15LEU 453
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 8ESF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
50 65Right-handed alpha
Helix 2
AA2
A
80 103Right-handed alpha
Helix 3
AA3
A
108 115Right-handed alpha
Helix 4
AA4
A
116 121Right-handed alpha
Helix 5
AA5
A
121 144Right-handed alpha
Helix 6
AA6
A
150 163Right-handed alpha
Helix 7
AA7
A
175 185Right-handed alpha
Helix 8
AA8
A
205 209Right-handed 310
Helix 9
AA9
A
214 216Right-handed 310
Helix 10
AB1
A
228 230Right-handed 310
Helix 11
AB2
A
234 239Right-handed 310
Helix 12
AB3
A
253 259Right-handed alpha
Helix 13
AB4
A
303 309Right-handed 310
Helix 14
AB5
A
349 354Right-handed alpha
Helix 15
AB6
A
372 376Right-handed 310
Helix 16
AB7
A
391 394Right-handed 310
Helix 17
AB8
A
395 400Right-handed alpha
Helix 18
AB9
A
412 417Right-handed 310
Helix 19
AC1
A
419 427Right-handed alpha
Helix 20
AC2
A
428 435Right-handed 310
Helix 21
AC3
A
443 459Right-handed alpha
Helix 22
AC4
B
50 63Right-handed alpha
Helix 23
AC5
B
81 103Right-handed alpha
Helix 24
AC6
B
108 115Right-handed alpha
Helix 25
AC7
B
116 121Right-handed alpha
Helix 26
AC8
B
121 144Right-handed alpha
Helix 27
AC9
B
150 162Right-handed alpha
Helix 28
AD1
B
175 187Right-handed alpha
Helix 29
AD2
B
205 209Right-handed 310
Helix 30
AD3
B
214 216Right-handed 310
Helix 31
AD4
B
228 230Right-handed 310
Helix 32
AD5
B
234 239Right-handed 310
Helix 33
AD6
B
253 259Right-handed alpha
Helix 34
AD7
B
260 264Right-handed 310
Helix 35
AD8
B
303 309Right-handed 310
Helix 36
AD9
B
349 354Right-handed alpha
Helix 37
AE1
B
372 376Right-handed 310
Helix 38
AE2
B
391 394Right-handed 310
Helix 39
AE3
B
395 400Right-handed alpha
Helix 40
AE4
B
412 417Right-handed 310
Helix 41
AE5
B
419 426Right-handed alpha
Helix 42
AE6
B
427 432Right-handed 310
Helix 43
AE7
B
443 453Right-handed alpha
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There are 7 sheets in PDB entry 8ESF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 27first strand
Strand 2
A
30 39anti-parallel
Strand 3
A
42 49anti-parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 149first strand
Strand 2
A
189 193parallel
Strand 3
A
221 225parallel
Strand 4
A
244 248parallel
Strand 5
A
291 293parallel
Strand 6
A
314 316parallel
Strand 7
A
336 338parallel
Strand 8
A
359 361parallel
Strand 9
A
381 383parallel
Strand 10
A
406 408parallel
Strand 11
A
436 437parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 212first strand
Strand 2
A
232 233parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 27first strand
Strand 2
B
30 39anti-parallel
Strand 3
B
42 49anti-parallel
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There are 11 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 149first strand
Strand 2
B
189 193parallel
Strand 3
B
221 225parallel
Strand 4
B
244 248parallel
Strand 5
B
291 293parallel
Strand 6
B
314 316parallel
Strand 7
B
336 338parallel
Strand 8
B
359 361parallel
Strand 9
B
381 383parallel
Strand 10
B
406 408parallel
Strand 11
B
436 437parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
211 212first strand
Strand 2
B
232 233parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
268 270first strand
Strand 2
B
281 283parallel
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