Analysis of interatomic Contacts of Structural Units in PDB entry:
8ESV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ESV entry

There are 4 chains in PDB entry 8ESV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 218ILE 670
B
 ALA 13SER 267
H
 GLN 20THR 140
L
 GLN 23ASP 133
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 8ESV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
229 237Right-handed alpha
Helix 2
AA2
A
238 260Right-handed alpha
Helix 3
AA3
A
279 285Right-handed 310
Helix 4
AA4
A
288 292Right-handed 310
Helix 5
AA5
A
296 307Right-handed alpha
Helix 6
AA6
A
323 327Right-handed 310
Helix 7
AA7
A
373 389Right-handed alpha
Helix 8
AA8
A
406 411Right-handed alpha
Helix 9
AA9
A
426 431Right-handed 310
Helix 10
AB1
A
433 447Right-handed alpha
Helix 11
AB2
A
447 452Right-handed alpha
Helix 12
AB3
A
590 594Right-handed 310
Helix 13
AB4
A
652 663Right-handed alpha
Helix 14
AB5
A
664 670Right-handed alpha
Helix 15
AB6
B
14 51Right-handed alpha
Helix 16
AB7
B
61 85Right-handed alpha
Helix 17
AB8
B
88 116Right-handed alpha
Helix 18
AB9
B
116 134Right-handed alpha
Helix 19
AC1
B
138 152Right-handed alpha
Helix 20
AC2
B
159 170Right-handed 310
Helix 21
AC3
B
195 200Right-handed 310
Helix 22
AC4
B
207 211Right-handed 310
Helix 23
AC5
B
218 230Right-handed alpha
Helix 24
AC6
B
230 267Right-handed alpha
Helix 25
AC7
H
80 83Right-handed 310
Helix 26
AC8
H
105 109Right-handed 310
Helix 27
AC9
H
118 122Right-handed 310
Helix 28
AD1
L
52 54Right-handed 310
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There are 11 sheets in PDB entry 8ESV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 277first strand
Strand 2
A
221 228parallel
Strand 3
A
314 319parallel
Strand 4
A
360 364parallel
Strand 5
A
329 331anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
366 367first strand
Strand 2
A
370 371anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
553 554first strand
Strand 2
A
561 562anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
578 579first strand
Strand 2
A
598 599anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
638 639first strand
Strand 2
A
645 646anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
23 26first strand
Strand 2
H
37 43anti-parallel
Strand 3
H
96 101anti-parallel
Strand 4
H
87 91anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
30 31first strand
Strand 2
H
130 134parallel
Strand 3
H
110 113anti-parallel
Strand 4
H
52 58anti-parallel
Strand 5
H
65 70anti-parallel
Strand 6
H
76 78anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
30 31first strand
Strand 2
H
130 134parallel
Strand 3
H
110 113anti-parallel
Strand 4
H
52 58anti-parallel
Strand 5
H
116 117anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
26 29first strand
Strand 2
L
42 51anti-parallel
Strand 3
L
85 98anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
32 35first strand
Strand 2
L
126 129parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
76 77first strand
Strand 2
L
68 72anti-parallel
Strand 3
L
56 61anti-parallel
Strand 4
L
108 113anti-parallel
Strand 5
L
120 121anti-parallel
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