Analysis of interatomic Contacts of Structural Units in PDB entry:
8ET0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ET0 entry

There are 4 chains in PDB entry 8ET0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 33	GLN 583
B	ALA 33	GLN 583
C	GLN 3	VAL 118
D	GLN 3	GLU 35

There are 69 helices in PDB entry 8ET0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	73	83	Right-handed alpha
Helix 2	AA2	A	85	95	Right-handed alpha
Helix 3	AA3	A	96	105	Right-handed alpha
Helix 4	AA4	A	105	122	Right-handed alpha
Helix 5	AA5	A	138	144	Right-handed alpha
Helix 6	AA6	A	173	182	Right-handed alpha
Helix 7	AA7	A	195	207	Right-handed alpha
Helix 8	AA8	A	230	235	Right-handed alpha
Helix 9	AA9	A	237	245	Right-handed alpha
Helix 10	AB1	A	265	270	Right-handed alpha
Helix 11	AB2	A	280	284	Right-handed 310
Helix 12	AB3	A	291	294	Right-handed 310
Helix 13	AB4	A	295	320	Right-handed alpha
Helix 14	AB5	A	324	347	Right-handed alpha
Helix 15	AB6	A	347	354	Right-handed alpha
Helix 16	AB7	A	362	367	Right-handed 310
Helix 17	AB8	A	378	385	Right-handed alpha
Helix 18	AB9	A	386	391	Right-handed 310
Helix 19	AC1	A	403	408	Right-handed alpha
Helix 20	AC2	A	411	418	Right-handed alpha
Helix 21	AC3	A	418	429	Right-handed alpha
Helix 22	AC4	A	441	443	Right-handed 310
Helix 23	AC5	A	444	458	Right-handed alpha
Helix 24	AC6	A	462	470	Right-handed alpha
Helix 25	AC7	A	477	483	Right-handed alpha
Helix 26	AC8	A	485	496	Right-handed alpha
Helix 27	AC9	A	497	501	Right-handed 310
Helix 28	AD1	A	502	510	Right-handed alpha
Helix 29	AD2	A	519	536	Right-handed alpha
Helix 30	AD3	A	537	541	Right-handed 310
Helix 31	AD4	A	546	551	Right-handed 310
Helix 32	AD5	A	552	561	Right-handed alpha
Helix 33	AD6	A	563	572	Right-handed alpha
Helix 34	AD7	B	73	83	Right-handed alpha
Helix 35	AD8	B	85	95	Right-handed alpha
Helix 36	AD9	B	96	105	Right-handed alpha
Helix 37	AE1	B	105	122	Right-handed alpha
Helix 38	AE2	B	138	144	Right-handed alpha
Helix 39	AE3	B	173	182	Right-handed alpha
Helix 40	AE4	B	195	207	Right-handed alpha
Helix 41	AE5	B	230	235	Right-handed alpha
Helix 42	AE6	B	237	245	Right-handed alpha
Helix 43	AE7	B	265	270	Right-handed alpha
Helix 44	AE8	B	280	284	Right-handed 310
Helix 45	AE9	B	291	294	Right-handed 310
Helix 46	AF1	B	295	320	Right-handed alpha
Helix 47	AF2	B	324	347	Right-handed alpha
Helix 48	AF3	B	347	354	Right-handed alpha
Helix 49	AF4	B	362	367	Right-handed 310
Helix 50	AF5	B	378	385	Right-handed alpha
Helix 51	AF6	B	386	391	Right-handed 310
Helix 52	AF7	B	403	408	Right-handed alpha
Helix 53	AF8	B	411	418	Right-handed alpha
Helix 54	AF9	B	418	429	Right-handed alpha
Helix 55	AG1	B	441	443	Right-handed 310
Helix 56	AG2	B	444	458	Right-handed alpha
Helix 57	AG3	B	462	470	Right-handed alpha
Helix 58	AG4	B	477	483	Right-handed alpha
Helix 59	AG5	B	485	496	Right-handed alpha
Helix 60	AG6	B	497	501	Right-handed 310
Helix 61	AG7	B	502	510	Right-handed alpha
Helix 62	AG8	B	519	536	Right-handed alpha
Helix 63	AG9	B	537	541	Right-handed 310
Helix 64	AH1	B	546	551	Right-handed 310
Helix 65	AH2	B	552	561	Right-handed alpha
Helix 66	AH3	B	563	572	Right-handed alpha
Helix 67	AH4	C	88	92	Right-handed 310
Helix 68	AH5	D	62	66	Right-handed 310
Helix 69	AH6	D	88	92	Right-handed 310

There are 14 sheets in PDB entry 8ET0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	49	first strand
Strand 2	A	55	58	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	64	65	first strand
Strand 2	A	71	72	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	255	257	first strand
Strand 2	A	260	262	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	395	397	first strand
Strand 2	A	400	402	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	49	first strand
Strand 2	B	55	58	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	64	65	first strand
Strand 2	B	71	72	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	130	131	first strand
Strand 2	B	149	150	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	255	257	first strand
Strand 2	B	260	262	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	395	397	first strand
Strand 2	B	400	402	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	9	first strand
Strand 2	C	20	28	anti-parallel
Strand 3	C	79	84	anti-parallel
Strand 4	C	69	74	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	61	first strand
Strand 2	C	48	54	anti-parallel
Strand 3	C	33	41	anti-parallel
Strand 4	C	93	101	anti-parallel
Strand 5	C	108	110	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	61	first strand
Strand 2	C	48	54	anti-parallel
Strand 3	C	33	41	anti-parallel
Strand 4	C	93	101	anti-parallel
Strand 5	C	114	116	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	4	8	first strand
Strand 2	D	24	28	anti-parallel
Strand 3	D	79	81	anti-parallel
Strand 4	D	72	74	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	59	60	first strand
Strand 2	D	52	54	anti-parallel
Strand 3	D	33	41	anti-parallel
Strand 4	D	94	101	anti-parallel
Strand 5	D	108	110	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ET0

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ET0