Analysis of interatomic Contacts of Structural Units in PDB entry:
8ET9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ET9 entry

There is 1 chain in PDB entry 8ET9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3ARG 534
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 24 helices in PDB entry 8ET9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 13Right-handed alpha
Helix 2
AA2
A
16 39Right-handed alpha
Helix 3
AA3
A
39 44Right-handed alpha
Helix 4
AA4
A
53 63Right-handed alpha
Helix 5
AA5
A
66 74Right-handed alpha
Helix 6
AA6
A
84 90Right-handed alpha
Helix 7
AA7
A
134 140Right-handed alpha
Helix 8
AA8
A
145 175Right-handed alpha
Helix 9
AA9
A
175 195Right-handed alpha
Helix 10
AB1
A
199 229Right-handed alpha
Helix 11
AB2
A
233 259Right-handed alpha
Helix 12
AB3
A
261 270Right-handed alpha
Helix 13
AB4
A
270 280Right-handed alpha
Helix 14
AB5
A
281 283Right-handed 310
Helix 15
AB6
A
286 293Right-handed alpha
Helix 16
AB7
A
295 311Right-handed alpha
Helix 17
AB8
A
336 341Right-handed alpha
Helix 18
AB9
A
341 368Right-handed alpha
Helix 19
AC1
A
375 402Right-handed alpha
Helix 20
AC2
A
403 423Right-handed alpha
Helix 21
AC3
A
429 458Right-handed alpha
Helix 22
AC4
A
459 492Right-handed alpha
Helix 23
AC5
A
494 512Right-handed alpha
Helix 24
AC6
A
525 531Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 8ET9.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 51first strand
Strand 2
A
126 128anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il