Analysis of interatomic Contacts of Structural Units in PDB entry:
8ETF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ETF entry

There are 8 chains in PDB entry 8ETF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
H	CYS 2	ASN 325
A	CYS 2	ASN 325
B	CYS 2	HIS 330
C	CYS 2	HIS 331
D	CYS 2	ASN 325
E	CYS 2	HIS 330
F	CYS 2	HIS 331
G	CYS 2	ASN 325

There are 63 helices in PDB entry 8ETF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	H	100	109	Right-handed alpha
Helix 2	AA2	H	111	119	Right-handed alpha
Helix 3	AA3	H	174	183	Right-handed alpha
Helix 4	AA4	H	184	186	Right-handed 310
Helix 5	AA5	H	209	213	Right-handed 310
Helix 6	AA6	H	220	235	Right-handed alpha
Helix 7	AA7	H	240	254	Right-handed alpha
Helix 8	AA8	H	301	303	Right-handed 310
Helix 9	AA9	A	100	109	Right-handed alpha
Helix 10	AB1	A	111	119	Right-handed alpha
Helix 11	AB2	A	174	183	Right-handed alpha
Helix 12	AB3	A	184	186	Right-handed 310
Helix 13	AB4	A	209	213	Right-handed 310
Helix 14	AB5	A	220	235	Right-handed alpha
Helix 15	AB6	A	240	254	Right-handed alpha
Helix 16	AB7	A	301	303	Right-handed 310
Helix 17	AB8	B	100	109	Right-handed alpha
Helix 18	AB9	B	111	119	Right-handed alpha
Helix 19	AC1	B	174	183	Right-handed alpha
Helix 20	AC2	B	184	186	Right-handed 310
Helix 21	AC3	B	209	213	Right-handed 310
Helix 22	AC4	B	220	234	Right-handed alpha
Helix 23	AC5	B	240	254	Right-handed alpha
Helix 24	AC6	B	301	303	Right-handed 310
Helix 25	AC7	C	100	109	Right-handed alpha
Helix 26	AC8	C	111	119	Right-handed alpha
Helix 27	AC9	C	174	183	Right-handed alpha
Helix 28	AD1	C	184	186	Right-handed 310
Helix 29	AD2	C	209	213	Right-handed 310
Helix 30	AD3	C	220	234	Right-handed alpha
Helix 31	AD4	C	240	254	Right-handed alpha
Helix 32	AD5	C	301	303	Right-handed 310
Helix 33	AD6	D	100	109	Right-handed alpha
Helix 34	AD7	D	111	120	Right-handed alpha
Helix 35	AD8	D	174	183	Right-handed alpha
Helix 36	AD9	D	184	186	Right-handed 310
Helix 37	AE1	D	209	213	Right-handed 310
Helix 38	AE2	D	220	235	Right-handed alpha
Helix 39	AE3	D	240	255	Right-handed alpha
Helix 40	AE4	D	301	303	Right-handed 310
Helix 41	AE5	E	100	109	Right-handed alpha
Helix 42	AE6	E	111	119	Right-handed alpha
Helix 43	AE7	E	174	183	Right-handed alpha
Helix 44	AE8	E	184	186	Right-handed 310
Helix 45	AE9	E	209	213	Right-handed 310
Helix 46	AF1	E	220	235	Right-handed alpha
Helix 47	AF2	E	240	254	Right-handed alpha
Helix 48	AF3	E	301	303	Right-handed 310
Helix 49	AF4	F	100	109	Right-handed alpha
Helix 50	AF5	F	111	119	Right-handed alpha
Helix 51	AF6	F	174	183	Right-handed alpha
Helix 52	AF7	F	184	186	Right-handed 310
Helix 53	AF8	F	209	213	Right-handed 310
Helix 54	AF9	F	220	235	Right-handed alpha
Helix 55	AG1	F	240	254	Right-handed alpha
Helix 56	AG2	F	301	303	Right-handed 310
Helix 57	AG3	G	100	109	Right-handed alpha
Helix 58	AG4	G	111	119	Right-handed alpha
Helix 59	AG5	G	174	183	Right-handed alpha
Helix 60	AG6	G	184	186	Right-handed 310
Helix 61	AG7	G	209	213	Right-handed 310
Helix 62	AG8	G	220	235	Right-handed alpha
Helix 63	AG9	G	240	254	Right-handed alpha

There are 32 sheets in PDB entry 8ETF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	168	169	first strand
Strand 2	H	3	7	anti-parallel
Strand 3	H	13	20	anti-parallel
Strand 4	H	271	279	anti-parallel
Strand 5	H	284	289	anti-parallel
Strand 6	H	292	299	anti-parallel
Strand 7	B	322	323	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	158	164	first strand
Strand 2	H	149	155	anti-parallel
Strand 3	H	138	144	anti-parallel
Strand 4	H	73	79	anti-parallel
Strand 5	H	61	69	anti-parallel
Strand 6	H	51	58	anti-parallel
Strand 7	H	27	31	anti-parallel
Strand 8	H	311	313	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	94	97	first strand
Strand 2	H	122	125	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	263	265	first strand
Strand 2	H	268	269	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	322	323	first strand
Strand 2	B	292	299	parallel
Strand 3	B	284	289	anti-parallel
Strand 4	B	271	279	anti-parallel
Strand 5	B	13	20	anti-parallel
Strand 6	B	3	7	anti-parallel
Strand 7	B	168	169	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	168	169	first strand
Strand 2	A	3	7	anti-parallel
Strand 3	A	13	20	anti-parallel
Strand 4	A	271	279	anti-parallel
Strand 5	A	284	289	anti-parallel
Strand 6	A	292	299	anti-parallel
Strand 7	C	322	323	parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	158	163	first strand
Strand 2	A	149	155	anti-parallel
Strand 3	A	138	144	anti-parallel
Strand 4	A	73	79	anti-parallel
Strand 5	A	61	69	anti-parallel
Strand 6	A	51	58	anti-parallel
Strand 7	A	27	31	anti-parallel
Strand 8	A	311	313	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	94	97	first strand
Strand 2	A	122	125	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	263	265	first strand
Strand 2	A	268	269	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	322	323	first strand
Strand 2	C	292	299	parallel
Strand 3	C	284	289	anti-parallel
Strand 4	C	271	279	anti-parallel
Strand 5	C	13	20	anti-parallel
Strand 6	C	3	7	anti-parallel
Strand 7	C	168	169	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	158	163	first strand
Strand 2	B	149	155	anti-parallel
Strand 3	B	138	144	anti-parallel
Strand 4	B	73	79	anti-parallel
Strand 5	B	61	69	anti-parallel
Strand 6	B	51	58	anti-parallel
Strand 7	B	27	31	anti-parallel
Strand 8	B	311	313	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	94	97	first strand
Strand 2	B	122	125	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	263	265	first strand
Strand 2	B	268	269	anti-parallel

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There are 8 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	158	163	first strand
Strand 2	C	149	155	anti-parallel
Strand 3	C	138	144	anti-parallel
Strand 4	C	73	79	anti-parallel
Strand 5	C	61	69	anti-parallel
Strand 6	C	51	58	anti-parallel
Strand 7	C	27	31	anti-parallel
Strand 8	C	311	313	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	94	97	first strand
Strand 2	C	122	125	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	263	265	first strand
Strand 2	C	268	269	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	168	169	first strand
Strand 2	D	3	7	anti-parallel
Strand 3	D	13	20	anti-parallel
Strand 4	D	271	279	anti-parallel
Strand 5	D	284	289	anti-parallel
Strand 6	D	292	299	anti-parallel
Strand 7	E	322	323	parallel

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There are 8 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	158	163	first strand
Strand 2	D	149	155	anti-parallel
Strand 3	D	138	144	anti-parallel
Strand 4	D	73	79	anti-parallel
Strand 5	D	61	69	anti-parallel
Strand 6	D	51	58	anti-parallel
Strand 7	D	27	31	anti-parallel
Strand 8	D	311	313	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	94	97	first strand
Strand 2	D	122	125	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	263	265	first strand
Strand 2	D	268	269	anti-parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	322	323	first strand
Strand 2	E	292	299	parallel
Strand 3	E	284	289	anti-parallel
Strand 4	E	271	279	anti-parallel
Strand 5	E	13	20	anti-parallel
Strand 6	E	3	7	anti-parallel
Strand 7	E	168	169	anti-parallel

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There are 8 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	158	163	first strand
Strand 2	E	149	155	anti-parallel
Strand 3	E	138	144	anti-parallel
Strand 4	E	73	79	anti-parallel
Strand 5	E	61	69	anti-parallel
Strand 6	E	51	58	anti-parallel
Strand 7	E	27	31	anti-parallel
Strand 8	E	311	313	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	94	97	first strand
Strand 2	E	122	125	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	263	265	first strand
Strand 2	E	268	269	anti-parallel

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There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	168	169	first strand
Strand 2	F	3	7	anti-parallel
Strand 3	F	13	20	anti-parallel
Strand 4	F	271	279	anti-parallel
Strand 5	F	284	289	anti-parallel
Strand 6	F	292	299	anti-parallel
Strand 7	G	322	323	parallel

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There are 8 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	158	163	first strand
Strand 2	F	149	155	anti-parallel
Strand 3	F	138	144	anti-parallel
Strand 4	F	73	79	anti-parallel
Strand 5	F	61	69	anti-parallel
Strand 6	F	51	58	anti-parallel
Strand 7	F	27	31	anti-parallel
Strand 8	F	311	313	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	94	97	first strand
Strand 2	F	122	125	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	263	265	first strand
Strand 2	F	268	269	anti-parallel

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There are 7 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	322	323	first strand
Strand 2	G	296	299	parallel
Strand 3	G	284	289	anti-parallel
Strand 4	G	271	279	anti-parallel
Strand 5	G	13	20	anti-parallel
Strand 6	G	3	7	anti-parallel
Strand 7	G	168	169	anti-parallel

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There are 8 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	158	163	first strand
Strand 2	G	149	155	anti-parallel
Strand 3	G	138	144	anti-parallel
Strand 4	G	73	79	anti-parallel
Strand 5	G	61	69	anti-parallel
Strand 6	G	51	58	anti-parallel
Strand 7	G	27	31	anti-parallel
Strand 8	G	311	313	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	94	97	first strand
Strand 2	G	122	125	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	263	265	first strand
Strand 2	G	268	269	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ETF

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ETF