Analysis of interatomic Contacts of Structural Units in PDB entry:
8EU0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EU0 entry

There are 4 chains in PDB entry 8EU0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0THR 258
A
 PRO 260TYR 261
B
 HIS 0THR 258
B
 PRO 260TYR 261
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 8EU0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 19Right-handed alpha
Helix 2
AA2
A
67 72Right-handed 310
Helix 3
AA3
A
73 80Right-handed alpha
Helix 4
AA4
A
96 114Right-handed alpha
Helix 5
AA5
A
117 119Right-handed 310
Helix 6
AA6
A
132 145Right-handed alpha
Helix 7
AA7
A
186 194Right-handed alpha
Helix 8
AA8
A
211 215Right-handed 310
Helix 9
AA9
A
217 233Right-handed alpha
Helix 10
AB1
A
235 242Right-handed 310
Helix 11
AB2
A
245 249Right-handed 310
Helix 12
AB3
B
13 19Right-handed alpha
Helix 13
AB4
B
67 72Right-handed 310
Helix 14
AB5
B
73 80Right-handed alpha
Helix 15
AB6
B
96 114Right-handed alpha
Helix 16
AB7
B
117 119Right-handed 310
Helix 17
AB8
B
132 145Right-handed alpha
Helix 18
AB9
B
186 194Right-handed alpha
Helix 19
AC1
B
211 215Right-handed 310
Helix 20
AC2
B
217 232Right-handed alpha
Helix 21
AC3
B
235 242Right-handed 310
Helix 22
AC4
B
245 249Right-handed 310
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There are 4 sheets in PDB entry 8EU0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 31first strand
Strand 2
A
42 47anti-parallel
Strand 3
A
83 88anti-parallel
Strand 4
A
55 61parallel
Strand 5
A
121 131parallel
Strand 6
A
150 154parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 175first strand
Strand 2
A
200 205parallel
Strand 3
A
252 258anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 31first strand
Strand 2
B
42 47anti-parallel
Strand 3
B
83 88anti-parallel
Strand 4
B
55 61parallel
Strand 5
B
121 131parallel
Strand 6
B
150 154parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
170 175first strand
Strand 2
B
200 205parallel
Strand 3
B
252 258anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il