Analysis of interatomic Contacts of Structural Units in PDB entry:
8EU3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8EU3 entry

There are 4 chains in PDB entry 8EU3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 159	ASP 609
B	ILE 159	ASN 610
C	ALA 158	ASP 609
D	LEU 206	LEU 646

There are 73 helices in PDB entry 8EU3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	166	193	Right-handed alpha
Helix 2	AA2	A	193	199	Right-handed alpha
Helix 3	AA3	A	199	222	Right-handed alpha
Helix 4	AA4	A	235	245	Right-handed alpha
Helix 5	AA5	A	246	255	Right-handed alpha
Helix 6	AA6	A	270	279	Right-handed 310
Helix 7	AA7	A	280	295	Right-handed alpha
Helix 8	AA8	A	297	329	Right-handed alpha
Helix 9	AA9	A	347	364	Right-handed alpha
Helix 10	AB1	A	374	427	Right-handed alpha
Helix 11	AB2	A	430	447	Right-handed alpha
Helix 12	AB3	A	452	458	Right-handed alpha
Helix 13	AB4	A	461	473	Right-handed alpha
Helix 14	AB5	A	473	478	Right-handed alpha
Helix 15	AB6	A	487	498	Right-handed alpha
Helix 16	AB7	A	548	554	Right-handed alpha
Helix 17	AB8	A	581	589	Right-handed alpha
Helix 18	AB9	A	591	609	Right-handed alpha
Helix 19	AC1	B	165	193	Right-handed alpha
Helix 20	AC2	B	194	199	Right-handed alpha
Helix 21	AC3	B	199	223	Right-handed alpha
Helix 22	AC4	B	235	245	Right-handed alpha
Helix 23	AC5	B	246	256	Right-handed alpha
Helix 24	AC6	B	270	279	Right-handed 310
Helix 25	AC7	B	280	295	Right-handed alpha
Helix 26	AC8	B	297	329	Right-handed alpha
Helix 27	AC9	B	347	364	Right-handed alpha
Helix 28	AD1	B	374	406	Right-handed alpha
Helix 29	AD2	B	407	427	Right-handed alpha
Helix 30	AD3	B	430	448	Right-handed alpha
Helix 31	AD4	B	452	457	Right-handed alpha
Helix 32	AD5	B	461	478	Right-handed alpha
Helix 33	AD6	B	487	498	Right-handed alpha
Helix 34	AD7	B	580	588	Right-handed alpha
Helix 35	AD8	B	591	610	Right-handed alpha
Helix 36	AD9	C	166	193	Right-handed alpha
Helix 37	AE1	C	194	199	Right-handed alpha
Helix 38	AE2	C	199	222	Right-handed alpha
Helix 39	AE3	C	235	245	Right-handed alpha
Helix 40	AE4	C	247	256	Right-handed alpha
Helix 41	AE5	C	270	279	Right-handed 310
Helix 42	AE6	C	280	295	Right-handed alpha
Helix 43	AE7	C	297	329	Right-handed alpha
Helix 44	AE8	C	347	364	Right-handed alpha
Helix 45	AE9	C	374	407	Right-handed alpha
Helix 46	AF1	C	407	428	Right-handed alpha
Helix 47	AF2	C	430	447	Right-handed alpha
Helix 48	AF3	C	452	458	Right-handed alpha
Helix 49	AF4	C	461	478	Right-handed alpha
Helix 50	AF5	C	487	498	Right-handed alpha
Helix 51	AF6	C	581	589	Right-handed alpha
Helix 52	AF7	C	591	609	Right-handed alpha
Helix 53	AF8	D	215	242	Right-handed alpha
Helix 54	AF9	D	249	270	Right-handed alpha
Helix 55	AG1	D	271	275	Right-handed 310
Helix 56	AG2	D	286	296	Right-handed alpha
Helix 57	AG3	D	297	307	Right-handed alpha
Helix 58	AG4	D	309	312	Right-handed 310
Helix 59	AG5	D	313	318	Right-handed alpha
Helix 60	AG6	D	320	329	Right-handed 310
Helix 61	AG7	D	330	345	Right-handed alpha
Helix 62	AG8	D	347	379	Right-handed alpha
Helix 63	AG9	D	392	406	Right-handed alpha
Helix 64	AH1	D	416	449	Right-handed alpha
Helix 65	AH2	D	449	469	Right-handed alpha
Helix 66	AH3	D	472	491	Right-handed alpha
Helix 67	AH4	D	495	500	Right-handed alpha
Helix 68	AH5	D	503	521	Right-handed alpha
Helix 69	AH6	D	523	527	Right-handed 310
Helix 70	AH7	D	529	539	Right-handed alpha
Helix 71	AH8	D	592	597	Right-handed alpha
Helix 72	AH9	D	621	629	Right-handed alpha
Helix 73	AI1	D	631	646	Right-handed alpha

There are 12 sheets in PDB entry 8EU3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	226	228	first strand
Strand 2	A	231	233	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	499	500	first strand
Strand 2	A	576	580	anti-parallel
Strand 3	A	518	522	anti-parallel
Strand 4	A	546	547	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	540	541	first strand
Strand 2	A	527	530	anti-parallel
Strand 3	A	567	570	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	227	228	first strand
Strand 2	B	231	232	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	499	503	first strand
Strand 2	B	574	578	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	520	521	first strand
Strand 2	B	546	547	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	529	530	first strand
Strand 2	B	567	568	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	227	228	first strand
Strand 2	C	231	232	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	499	502	first strand
Strand 2	C	575	580	anti-parallel
Strand 3	C	518	521	anti-parallel
Strand 4	C	546	547	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	508	510	first strand
Strand 2	C	567	570	anti-parallel
Strand 3	C	527	530	anti-parallel
Strand 4	C	539	540	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	541	542	first strand
Strand 2	D	616	620	anti-parallel
Strand 3	D	560	564	anti-parallel
Strand 4	D	589	590	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	550	552	first strand
Strand 2	D	607	610	anti-parallel
Strand 3	D	569	572	anti-parallel
Strand 4	D	580	584	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8EU3

Analysis of interatomic Contacts of Structural Units in PDB entry:
8EU3