Analysis of interatomic Contacts of Structural Units in PDB entry:
8EUH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EUH entry

There is 1 chain in PDB entry 8EUH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 428
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 8EUH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 17Right-handed alpha
Helix 2
AA2
A
18 22Right-handed 310
Helix 3
AA3
A
23 38Right-handed alpha
Helix 4
AA4
A
56 65Right-handed alpha
Helix 5
AA5
A
81 91Right-handed alpha
Helix 6
AA6
A
101 105Right-handed 310
Helix 7
AA7
A
108 116Right-handed alpha
Helix 8
AA8
A
117 121Right-handed 310
Helix 9
AA9
A
122 127Right-handed alpha
Helix 10
AB1
A
129 146Right-handed alpha
Helix 11
AB2
A
160 171Right-handed alpha
Helix 12
AB3
A
173 175Right-handed 310
Helix 13
AB4
A
176 186Right-handed alpha
Helix 14
AB5
A
204 233Right-handed alpha
Helix 15
AB6
A
237 244Right-handed alpha
Helix 16
AB7
A
253 286Right-handed alpha
Helix 17
AB8
A
286 296Right-handed alpha
Helix 18
AB9
A
299 312Right-handed alpha
Helix 19
AC1
A
341 346Right-handed alpha
Helix 20
AC2
A
379 395Right-handed alpha
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There are 5 sheets in PDB entry 8EUH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 43first strand
Strand 2
A
51 54anti-parallel
Strand 3
A
337 340parallel
Strand 4
A
317 321anti-parallel
Strand 5
A
70 71anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 152first strand
Strand 2
A
422 427anti-parallel
Strand 3
A
398 403anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 247first strand
Strand 2
A
250 251anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 327first strand
Strand 2
A
330 332anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
408 409first strand
Strand 2
A
418 420anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il