Analysis of interatomic Contacts of Structural Units in PDB entry:
8EVB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EVB entry

There are 4 chains in PDB entry 8EVB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 158ASN 610
B
ILE 159ASN 610
C
ILE 159MET 607
D
LEU 206LEU 646
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 69 helices in PDB entry 8EVB. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
165 192Right-handed alpha
Helix 2
AA2
A
192 198Right-handed alpha
Helix 3
AA3
A
200 222Right-handed alpha
Helix 4
AA4
A
235 245Right-handed alpha
Helix 5
AA5
A
246 256Right-handed alpha
Helix 6
AA6
A
273 279Right-handed 310
Helix 7
AA7
A
280 295Right-handed alpha
Helix 8
AA8
A
297 329Right-handed alpha
Helix 9
AA9
A
347 364Right-handed alpha
Helix 10
AB1
A
374 406Right-handed alpha
Helix 11
AB2
A
409 428Right-handed alpha
Helix 12
AB3
A
430 447Right-handed alpha
Helix 13
AB4
A
452 457Right-handed alpha
Helix 14
AB5
A
461 473Right-handed alpha
Helix 15
AB6
A
473 478Right-handed alpha
Helix 16
AB7
A
487 497Right-handed alpha
Helix 17
AB8
A
548 553Right-handed alpha
Helix 18
AB9
A
581 588Right-handed alpha
Helix 19
AC1
A
592 609Right-handed alpha
Helix 20
AC2
B
165 193Right-handed alpha
Helix 21
AC3
B
194 199Right-handed alpha
Helix 22
AC4
B
199 223Right-handed alpha
Helix 23
AC5
B
235 245Right-handed alpha
Helix 24
AC6
B
246 256Right-handed alpha
Helix 25
AC7
B
270 277Right-handed alpha
Helix 26
AC8
B
280 295Right-handed alpha
Helix 27
AC9
B
297 329Right-handed alpha
Helix 28
AD1
B
343 346Right-handed 310
Helix 29
AD2
B
347 364Right-handed alpha
Helix 30
AD3
B
374 404Right-handed alpha
Helix 31
AD4
B
408 427Right-handed alpha
Helix 32
AD5
B
430 447Right-handed alpha
Helix 33
AD6
B
452 457Right-handed alpha
Helix 34
AD7
B
461 477Right-handed alpha
Helix 35
AD8
B
580 587Right-handed alpha
Helix 36
AD9
B
591 610Right-handed alpha
Helix 37
AE1
C
165 193Right-handed alpha
Helix 38
AE2
C
199 222Right-handed alpha
Helix 39
AE3
C
235 246Right-handed alpha
Helix 40
AE4
C
247 255Right-handed alpha
Helix 41
AE5
C
271 278Right-handed alpha
Helix 42
AE6
C
281 295Right-handed alpha
Helix 43
AE7
C
297 329Right-handed alpha
Helix 44
AE8
C
347 364Right-handed alpha
Helix 45
AE9
C
374 407Right-handed alpha
Helix 46
AF1
C
407 428Right-handed alpha
Helix 47
AF2
C
430 447Right-handed alpha
Helix 48
AF3
C
453 458Right-handed alpha
Helix 49
AF4
C
461 478Right-handed alpha
Helix 50
AF5
C
487 496Right-handed alpha
Helix 51
AF6
C
581 588Right-handed alpha
Helix 52
AF7
C
592 607Right-handed alpha
Helix 53
AF8
D
215 242Right-handed alpha
Helix 54
AF9
D
249 270Right-handed alpha
Helix 55
AG1
D
271 275Right-handed 310
Helix 56
AG2
D
286 297Right-handed alpha
Helix 57
AG3
D
298 307Right-handed alpha
Helix 58
AG4
D
310 315Right-handed alpha
Helix 59
AG5
D
330 345Right-handed alpha
Helix 60
AG6
D
347 379Right-handed alpha
Helix 61
AG7
D
392 406Right-handed alpha
Helix 62
AG8
D
416 449Right-handed alpha
Helix 63
AG9
D
449 469Right-handed alpha
Helix 64
AH1
D
472 491Right-handed alpha
Helix 65
AH2
D
495 500Right-handed alpha
Helix 66
AH3
D
503 520Right-handed alpha
Helix 67
AH4
D
529 539Right-handed alpha
Helix 68
AH5
D
621 629Right-handed alpha
Helix 69
AH6
D
631 645Right-handed alpha
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There are 12 sheets in PDB entry 8EVB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
499 503first strand
Strand 2
A
574 580anti-parallel
Strand 3
A
518 522anti-parallel
Strand 4
A
546 547anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
508 510first strand
Strand 2
A
567 569anti-parallel
Strand 3
A
527 530anti-parallel
Strand 4
A
537 541anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
227 228first strand
Strand 2
B
231 232anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
499 503first strand
Strand 2
B
574 579anti-parallel
Strand 3
B
519 523anti-parallel
Strand 4
B
546 547anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
508 510first strand
Strand 2
B
567 569anti-parallel
Strand 3
B
527 530anti-parallel
Strand 4
B
540 541anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
514 515first strand
Strand 2
B
563 564anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
227 228first strand
Strand 2
C
231 232anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
501 503first strand
Strand 2
C
574 580anti-parallel
Strand 3
C
518 522anti-parallel
Strand 4
C
546 547anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
508 510first strand
Strand 2
C
567 570anti-parallel
Strand 3
C
527 530anti-parallel
Strand 4
C
537 541anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
278 279first strand
Strand 2
D
282 283anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
541 545first strand
Strand 2
D
614 620anti-parallel
Strand 3
D
560 564anti-parallel
Strand 4
D
589 590anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
550 552first strand
Strand 2
D
607 610anti-parallel
Strand 3
D
568 572anti-parallel
Strand 4
D
580 585anti-parallel
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