Analysis of interatomic Contacts of Structural Units in PDB entry:
8EVL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8EVL entry

There are 3 chains in PDB entry 8EVL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 0	GLU 327
B	SER 0	GLU 327
C	SER 0	GLU 327

There are 2 helices in PDB entry 8EVL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	166	173	Right-handed alpha
Helix 2	AA2	B	166	173	Right-handed alpha

There are 21 sheets in PDB entry 8EVL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	10	first strand
Strand 2	A	320	327	anti-parallel
Strand 3	A	313	317	anti-parallel
Strand 4	A	301	306	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	14	19	first strand
Strand 2	A	25	30	anti-parallel
Strand 3	A	34	39	anti-parallel
Strand 4	A	44	50	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	61	first strand
Strand 2	A	67	72	anti-parallel
Strand 3	A	77	81	anti-parallel
Strand 4	A	86	91	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	103	first strand
Strand 2	A	109	114	anti-parallel
Strand 3	A	119	123	anti-parallel
Strand 4	A	128	133	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	140	145	first strand
Strand 2	A	151	156	anti-parallel
Strand 3	A	160	165	anti-parallel
Strand 4	A	203	209	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	215	220	first strand
Strand 2	A	226	231	anti-parallel
Strand 3	A	236	241	anti-parallel
Strand 4	A	246	252	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	259	264	first strand
Strand 2	A	270	275	anti-parallel
Strand 3	A	279	284	anti-parallel
Strand 4	A	290	295	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	10	first strand
Strand 2	B	320	326	anti-parallel
Strand 3	B	313	317	anti-parallel
Strand 4	B	301	306	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	14	19	first strand
Strand 2	B	25	30	anti-parallel
Strand 3	B	34	39	anti-parallel
Strand 4	B	44	50	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	61	first strand
Strand 2	B	67	72	anti-parallel
Strand 3	B	77	81	anti-parallel
Strand 4	B	86	91	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	103	first strand
Strand 2	B	109	114	anti-parallel
Strand 3	B	119	123	anti-parallel
Strand 4	B	128	133	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	140	145	first strand
Strand 2	B	151	156	anti-parallel
Strand 3	B	161	165	anti-parallel
Strand 4	B	203	208	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	215	220	first strand
Strand 2	B	226	231	anti-parallel
Strand 3	B	236	241	anti-parallel
Strand 4	B	246	252	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	259	264	first strand
Strand 2	B	270	275	anti-parallel
Strand 3	B	279	284	anti-parallel
Strand 4	B	290	295	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2	10	first strand
Strand 2	C	320	327	anti-parallel
Strand 3	C	313	317	anti-parallel
Strand 4	C	301	306	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	14	19	first strand
Strand 2	C	25	30	anti-parallel
Strand 3	C	34	39	anti-parallel
Strand 4	C	44	50	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	56	61	first strand
Strand 2	C	67	72	anti-parallel
Strand 3	C	77	81	anti-parallel
Strand 4	C	89	91	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	98	103	first strand
Strand 2	C	109	114	anti-parallel
Strand 3	C	119	123	anti-parallel
Strand 4	C	128	133	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	140	145	first strand
Strand 2	C	151	156	anti-parallel
Strand 3	C	160	165	anti-parallel
Strand 4	C	203	209	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	215	220	first strand
Strand 2	C	226	231	anti-parallel
Strand 3	C	236	241	anti-parallel
Strand 4	C	246	252	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	259	264	first strand
Strand 2	C	270	275	anti-parallel
Strand 3	C	279	284	anti-parallel
Strand 4	C	290	295	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8EVL

Analysis of interatomic Contacts of Structural Units in PDB entry:
8EVL