Analysis of interatomic Contacts of Structural Units in PDB entry:
8EVN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8EVN entry

There are 4 chains in PDB entry 8EVN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 4	SER 286
B	ILE 4	ILE 292
C	ILE 4	ARG 283
D	ILE 4	VAL 284

There are 24 helices in PDB entry 8EVN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	27	42	Right-handed alpha
Helix 2	AA2	A	53	65	Right-handed alpha
Helix 3	AA3	A	129	135	Right-handed alpha
Helix 4	AA4	A	137	147	Right-handed alpha
Helix 5	AA5	A	210	226	Right-handed alpha
Helix 6	AA6	A	227	229	Right-handed 310
Helix 7	AA7	B	27	42	Right-handed alpha
Helix 8	AA8	B	53	65	Right-handed alpha
Helix 9	AA9	B	129	135	Right-handed alpha
Helix 10	AB1	B	137	147	Right-handed alpha
Helix 11	AB2	B	210	226	Right-handed alpha
Helix 12	AB3	B	227	229	Right-handed 310
Helix 13	AB4	C	27	42	Right-handed alpha
Helix 14	AB5	C	53	65	Right-handed alpha
Helix 15	AB6	C	129	135	Right-handed alpha
Helix 16	AB7	C	137	146	Right-handed alpha
Helix 17	AB8	C	210	226	Right-handed alpha
Helix 18	AB9	C	227	229	Right-handed 310
Helix 19	AC1	D	27	42	Right-handed alpha
Helix 20	AC2	D	54	65	Right-handed alpha
Helix 21	AC3	D	129	135	Right-handed alpha
Helix 22	AC4	D	137	147	Right-handed alpha
Helix 23	AC5	D	210	226	Right-handed alpha
Helix 24	AC6	D	227	229	Right-handed 310

There are 17 sheets in PDB entry 8EVN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	8	first strand
Strand 2	A	15	18	anti-parallel
Strand 3	A	43	46	parallel
Strand 4	A	241	245	anti-parallel
Strand 5	A	109	116	anti-parallel
Strand 6	A	263	268	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	231	234	first strand
Strand 2	A	124	128	anti-parallel
Strand 3	A	249	253	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	203	206	first strand
Strand 2	A	148	152	anti-parallel
Strand 3	A	180	184	anti-parallel
Strand 4	A	283	286	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	188	first strand
Strand 2	A	195	197	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	8	first strand
Strand 2	B	15	18	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	43	46	first strand
Strand 2	B	241	245	anti-parallel
Strand 3	B	109	116	anti-parallel
Strand 4	B	263	269	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	231	234	first strand
Strand 2	B	124	128	anti-parallel
Strand 3	B	249	253	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	203	206	first strand
Strand 2	B	148	152	anti-parallel
Strand 3	B	180	184	anti-parallel
Strand 4	B	283	286	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	186	188	first strand
Strand 2	B	195	197	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	8	first strand
Strand 2	C	15	18	anti-parallel
Strand 3	C	43	46	parallel
Strand 4	C	241	245	anti-parallel
Strand 5	C	109	116	anti-parallel
Strand 6	C	263	268	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	231	234	first strand
Strand 2	C	124	128	anti-parallel
Strand 3	C	249	253	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	180	184	first strand
Strand 2	C	148	152	anti-parallel
Strand 3	C	203	206	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	186	188	first strand
Strand 2	C	195	197	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	5	8	first strand
Strand 2	D	15	18	anti-parallel
Strand 3	D	43	47	parallel
Strand 4	D	240	245	anti-parallel
Strand 5	D	109	116	anti-parallel
Strand 6	D	263	268	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	231	234	first strand
Strand 2	D	124	128	anti-parallel
Strand 3	D	249	253	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	181	184	first strand
Strand 2	D	148	151	anti-parallel
Strand 3	D	203	206	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	186	188	first strand
Strand 2	D	195	197	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8EVN

Analysis of interatomic Contacts of Structural Units in PDB entry:
8EVN