Analysis of interatomic Contacts of Structural Units in PDB entry:
8EVV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8EVV entry

There are 4 chains in PDB entry 8EVV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 3	LYS 343
B	GLN 3	ALA 341
C	GLY 2	ALA 341
D	ASP 4	GLY 340

There are 54 helices in PDB entry 8EVV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	36	Right-handed alpha
Helix 2	AA2	A	51	62	Right-handed alpha
Helix 3	AA3	A	86	90	Right-handed 310
Helix 4	AA4	A	101	106	Right-handed alpha
Helix 5	AA5	A	107	116	Right-handed alpha
Helix 6	AA6	A	124	133	Right-handed alpha
Helix 7	AA7	A	133	144	Right-handed alpha
Helix 8	AA8	A	157	165	Right-handed alpha
Helix 9	AA9	A	187	199	Right-handed alpha
Helix 10	AB1	A	259	277	Right-handed alpha
Helix 11	AB2	A	310	319	Right-handed alpha
Helix 12	AB3	A	322	340	Right-handed alpha
Helix 13	AB4	B	15	17	Right-handed 310
Helix 14	AB5	B	18	36	Right-handed alpha
Helix 15	AB6	B	51	62	Right-handed alpha
Helix 16	AB7	B	86	90	Right-handed 310
Helix 17	AB8	B	101	106	Right-handed alpha
Helix 18	AB9	B	107	116	Right-handed alpha
Helix 19	AC1	B	124	133	Right-handed alpha
Helix 20	AC2	B	133	144	Right-handed alpha
Helix 21	AC3	B	158	165	Right-handed alpha
Helix 22	AC4	B	187	189	Right-handed 310
Helix 23	AC5	B	190	199	Right-handed alpha
Helix 24	AC6	B	259	277	Right-handed alpha
Helix 25	AC7	B	310	319	Right-handed alpha
Helix 26	AC8	B	322	340	Right-handed alpha
Helix 27	AC9	C	15	36	Right-handed alpha
Helix 28	AD1	C	51	62	Right-handed alpha
Helix 29	AD2	C	101	106	Right-handed alpha
Helix 30	AD3	C	107	116	Right-handed alpha
Helix 31	AD4	C	124	133	Right-handed alpha
Helix 32	AD5	C	133	144	Right-handed alpha
Helix 33	AD6	C	157	165	Right-handed alpha
Helix 34	AD7	C	187	189	Right-handed 310
Helix 35	AD8	C	190	200	Right-handed alpha
Helix 36	AD9	C	237	243	Right-handed alpha
Helix 37	AE1	C	259	277	Right-handed alpha
Helix 38	AE2	C	310	318	Right-handed alpha
Helix 39	AE3	C	322	340	Right-handed alpha
Helix 40	AE4	D	15	17	Right-handed 310
Helix 41	AE5	D	18	36	Right-handed alpha
Helix 42	AE6	D	51	61	Right-handed alpha
Helix 43	AE7	D	101	106	Right-handed alpha
Helix 44	AE8	D	107	116	Right-handed alpha
Helix 45	AE9	D	124	133	Right-handed alpha
Helix 46	AF1	D	133	144	Right-handed alpha
Helix 47	AF2	D	157	165	Right-handed alpha
Helix 48	AF3	D	187	189	Right-handed 310
Helix 49	AF4	D	190	199	Right-handed alpha
Helix 50	AF5	D	200	202	Right-handed 310
Helix 51	AF6	D	237	243	Right-handed alpha
Helix 52	AF7	D	259	277	Right-handed alpha
Helix 53	AF8	D	310	319	Right-handed alpha
Helix 54	AF9	D	322	339	Right-handed alpha

There are 16 sheets in PDB entry 8EVV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	49	first strand
Strand 2	A	39	44	anti-parallel
Strand 3	A	7	12	parallel
Strand 4	A	94	97	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	153	first strand
Strand 2	A	205	209	anti-parallel
Strand 3	A	169	173	anti-parallel
Strand 4	A	183	185	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	224	225	first strand
Strand 2	A	214	221	anti-parallel
Strand 3	A	229	232	anti-parallel
Strand 4	A	251	253	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	224	225	first strand
Strand 2	A	214	221	anti-parallel
Strand 3	A	282	289	anti-parallel
Strand 4	A	295	301	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	49	first strand
Strand 2	B	39	44	anti-parallel
Strand 3	B	7	12	parallel
Strand 4	B	94	97	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	151	153	first strand
Strand 2	B	205	209	anti-parallel
Strand 3	B	169	173	anti-parallel
Strand 4	B	183	185	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	224	225	first strand
Strand 2	B	214	221	anti-parallel
Strand 3	B	229	231	anti-parallel
Strand 4	B	252	253	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	224	225	first strand
Strand 2	B	214	221	anti-parallel
Strand 3	B	282	289	anti-parallel
Strand 4	B	295	301	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	48	49	first strand
Strand 2	C	39	44	anti-parallel
Strand 3	C	7	12	parallel
Strand 4	C	94	97	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	151	153	first strand
Strand 2	C	205	209	anti-parallel
Strand 3	C	169	173	anti-parallel
Strand 4	C	183	185	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	224	225	first strand
Strand 2	C	214	221	anti-parallel
Strand 3	C	229	231	anti-parallel
Strand 4	C	252	253	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	224	225	first strand
Strand 2	C	214	221	anti-parallel
Strand 3	C	282	289	anti-parallel
Strand 4	C	295	301	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	48	49	first strand
Strand 2	D	39	44	anti-parallel
Strand 3	D	7	12	parallel
Strand 4	D	94	97	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	151	153	first strand
Strand 2	D	205	209	anti-parallel
Strand 3	D	169	173	anti-parallel
Strand 4	D	183	185	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	224	225	first strand
Strand 2	D	214	221	anti-parallel
Strand 3	D	229	232	anti-parallel
Strand 4	D	251	253	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	224	225	first strand
Strand 2	D	214	221	anti-parallel
Strand 3	D	282	289	anti-parallel
Strand 4	D	295	301	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8EVV

Analysis of interatomic Contacts of Structural Units in PDB entry:
8EVV