Analysis of interatomic Contacts of Structural Units in PDB entry:
8EVW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EVW entry

There are 2 chains in PDB entry 8EVW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 5CYS 338
B
 LYS 5CYS 338
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 8EVW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 36Right-handed alpha
Helix 2
AA2
A
51 60Right-handed alpha
Helix 3
AA3
A
69 77Right-handed alpha
Helix 4
AA4
A
101 106Right-handed alpha
Helix 5
AA5
A
107 116Right-handed alpha
Helix 6
AA6
A
124 133Right-handed alpha
Helix 7
AA7
A
133 144Right-handed alpha
Helix 8
AA8
A
157 165Right-handed alpha
Helix 9
AA9
A
187 200Right-handed alpha
Helix 10
AB1
A
240 246Right-handed alpha
Helix 11
AB2
A
259 277Right-handed alpha
Helix 12
AB3
A
310 319Right-handed alpha
Helix 13
AB4
A
322 338Right-handed alpha
Helix 14
AB5
B
18 36Right-handed alpha
Helix 15
AB6
B
51 60Right-handed alpha
Helix 16
AB7
B
69 75Right-handed alpha
Helix 17
AB8
B
86 90Right-handed 310
Helix 18
AB9
B
101 106Right-handed alpha
Helix 19
AC1
B
107 117Right-handed alpha
Helix 20
AC2
B
124 133Right-handed alpha
Helix 21
AC3
B
133 144Right-handed alpha
Helix 22
AC4
B
157 165Right-handed alpha
Helix 23
AC5
B
187 189Right-handed 310
Helix 24
AC6
B
190 200Right-handed alpha
Helix 25
AC7
B
240 246Right-handed alpha
Helix 26
AC8
B
259 277Right-handed alpha
Helix 27
AC9
B
310 319Right-handed alpha
Helix 28
AD1
B
322 338Right-handed alpha
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There are 8 sheets in PDB entry 8EVW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
39 44anti-parallel
Strand 3
A
7 12parallel
Strand 4
A
94 97parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 153first strand
Strand 2
A
205 209anti-parallel
Strand 3
A
169 173anti-parallel
Strand 4
A
183 185anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 225first strand
Strand 2
A
214 221anti-parallel
Strand 3
A
229 232anti-parallel
Strand 4
A
251 253anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 225first strand
Strand 2
A
214 221anti-parallel
Strand 3
A
282 289anti-parallel
Strand 4
A
295 301anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 49first strand
Strand 2
B
39 44anti-parallel
Strand 3
B
7 12parallel
Strand 4
B
94 97parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
151 153first strand
Strand 2
B
205 209anti-parallel
Strand 3
B
169 173anti-parallel
Strand 4
B
183 185anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
224 225first strand
Strand 2
B
213 221anti-parallel
Strand 3
B
229 232anti-parallel
Strand 4
B
251 253anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
224 225first strand
Strand 2
B
213 221anti-parallel
Strand 3
B
282 290anti-parallel
Strand 4
B
295 301anti-parallel
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