Analysis of interatomic Contacts of Structural Units in PDB entry:
8EWA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EWA entry

There are 2 chains in PDB entry 8EWA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 13ARG 322
B
 HIS 13ARG 322
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 8EWA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 38Right-handed alpha
Helix 2
AA2
A
50 60Right-handed alpha
Helix 3
AA3
A
68 73Right-handed 310
Helix 4
AA4
A
88 97Right-handed alpha
Helix 5
AA5
A
104 111Right-handed alpha
Helix 6
AA6
A
112 115Right-handed 310
Helix 7
AA7
A
125 140Right-handed alpha
Helix 8
AA8
A
177 181Right-handed 310
Helix 9
AA9
A
203 215Right-handed alpha
Helix 10
AB1
A
229 236Right-handed alpha
Helix 11
AB2
A
237 239Right-handed 310
Helix 12
AB3
A
286 303Right-handed alpha
Helix 13
AB4
A
306 317Right-handed alpha
Helix 14
AB5
B
27 38Right-handed alpha
Helix 15
AB6
B
50 59Right-handed alpha
Helix 16
AB7
B
68 73Right-handed 310
Helix 17
AB8
B
88 97Right-handed alpha
Helix 18
AB9
B
104 111Right-handed alpha
Helix 19
AC1
B
112 115Right-handed 310
Helix 20
AC2
B
125 140Right-handed alpha
Helix 21
AC3
B
177 181Right-handed 310
Helix 22
AC4
B
203 216Right-handed alpha
Helix 23
AC5
B
229 236Right-handed alpha
Helix 24
AC6
B
237 239Right-handed 310
Helix 25
AC7
B
286 303Right-handed alpha
Helix 26
AC8
B
306 316Right-handed alpha
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There are 4 sheets in PDB entry 8EWA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 65first strand
Strand 2
A
41 46parallel
Strand 3
A
17 21parallel
Strand 4
A
77 80parallel
Strand 5
A
101 103parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 154first strand
Strand 2
A
145 148anti-parallel
Strand 3
A
166 170parallel
Strand 4
A
116 121parallel
Strand 5
A
185 188parallel
Strand 6
A
222 226parallel
Strand 7
A
243 247parallel
Strand 8
A
254 262parallel
Strand 9
A
265 271anti-parallel
Strand 10
A
278 282anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 65first strand
Strand 2
B
41 46parallel
Strand 3
B
17 21parallel
Strand 4
B
77 80parallel
Strand 5
B
101 103parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
151 154first strand
Strand 2
B
145 148anti-parallel
Strand 3
B
166 170parallel
Strand 4
B
116 121parallel
Strand 5
B
185 188parallel
Strand 6
B
222 226parallel
Strand 7
B
243 247parallel
Strand 8
B
254 262parallel
Strand 9
B
265 271anti-parallel
Strand 10
B
278 282anti-parallel
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