Analysis of interatomic Contacts of Structural Units in PDB entry:
8EWG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EWG entry

There are 2 chains in PDB entry 8EWG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 17GLY 1225
B
 G 1 A 57
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 50 helices in PDB entry 8EWG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
175 180Right-handed alpha
Helix 2
AA2
A
197 205Right-handed alpha
Helix 3
AA3
A
220 230Right-handed alpha
Helix 4
AA4
A
233 244Right-handed alpha
Helix 5
AA5
A
249 272Right-handed alpha
Helix 6
AA6
A
275 294Right-handed alpha
Helix 7
AA7
A
300 310Right-handed alpha
Helix 8
AA8
A
312 319Right-handed alpha
Helix 9
AA9
A
321 347Right-handed alpha
Helix 10
AB1
A
364 394Right-handed alpha
Helix 11
AB2
A
404 413Right-handed alpha
Helix 12
AB3
A
422 435Right-handed alpha
Helix 13
AB4
A
438 453Right-handed alpha
Helix 14
AB5
A
463 469Right-handed alpha
Helix 15
AB6
A
469 474Right-handed alpha
Helix 16
AB7
A
475 497Right-handed alpha
Helix 17
AB8
A
505 517Right-handed alpha
Helix 18
AB9
A
523 534Right-handed alpha
Helix 19
AC1
A
535 548Right-handed alpha
Helix 20
AC2
A
549 553Right-handed 310
Helix 21
AC3
A
557 562Right-handed alpha
Helix 22
AC4
A
581 607Right-handed alpha
Helix 23
AC5
A
656 674Right-handed alpha
Helix 24
AC6
A
674 682Right-handed alpha
Helix 25
AC7
A
683 700Right-handed alpha
Helix 26
AC8
A
714 721Right-handed alpha
Helix 27
AC9
A
726 749Right-handed alpha
Helix 28
AD1
A
754 777Right-handed alpha
Helix 29
AD2
A
779 784Right-handed alpha
Helix 30
AD3
A
789 795Right-handed alpha
Helix 31
AD4
A
815 827Right-handed alpha
Helix 32
AD5
A
831 850Right-handed alpha
Helix 33
AD6
A
856 876Right-handed alpha
Helix 34
AD7
A
892 899Right-handed 310
Helix 35
AD8
A
902 907Right-handed 310
Helix 36
AD9
A
918 930Right-handed alpha
Helix 37
AE1
A
932 940Right-handed alpha
Helix 38
AE2
A
948 955Right-handed alpha
Helix 39
AE3
A
971 989Right-handed alpha
Helix 40
AE4
A
994 1019Right-handed alpha
Helix 41
AE5
A
1020 1034Right-handed alpha
Helix 42
AE6
A
1036 1058Right-handed alpha
Helix 43
AE7
A
1065 1073Right-handed alpha
Helix 44
AE8
A
1077 1086Right-handed alpha
Helix 45
AE9
A
1088 1096Right-handed alpha
Helix 46
AF1
A
1108 1116Right-handed alpha
Helix 47
AF2
A
1117 1125Right-handed 310
Helix 48
AF3
A
1134 1148Right-handed alpha
Helix 49
AF4
A
1150 1167Right-handed alpha
Helix 50
AF5
A
1209 1221Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 8EWG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 19first strand
Strand 2
A
24 25anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 187first strand
Strand 2
A
193 195anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1173 1176first strand
Strand 2
A
1182 1186anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1191 1193first strand
Strand 2
A
1204 1206anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il