Analysis of interatomic Contacts of Structural Units in PDB entry:
8EWO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EWO entry

There are 3 chains in PDB entry 8EWO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0PHE 258
B
 MET 1PHE 258
C
 GLY 0PHE 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 8EWO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 44Right-handed alpha
Helix 2
AA2
A
58 63Right-handed alpha
Helix 3
AA3
A
64 73Right-handed alpha
Helix 4
AA4
A
146 159Right-handed alpha
Helix 5
AA5
A
172 184Right-handed alpha
Helix 6
AA6
A
187 203Right-handed alpha
Helix 7
AA7
A
212 219Right-handed alpha
Helix 8
AA8
A
220 223Right-handed 310
Helix 9
AA9
A
226 238Right-handed alpha
Helix 10
AB1
A
243 257Right-handed alpha
Helix 11
AB2
B
33 44Right-handed alpha
Helix 12
AB3
B
58 63Right-handed alpha
Helix 13
AB4
B
64 73Right-handed alpha
Helix 14
AB5
B
146 159Right-handed alpha
Helix 15
AB6
B
172 184Right-handed alpha
Helix 16
AB7
B
187 203Right-handed alpha
Helix 17
AB8
B
212 219Right-handed alpha
Helix 18
AB9
B
220 223Right-handed 310
Helix 19
AC1
B
226 238Right-handed alpha
Helix 20
AC2
B
243 258Right-handed alpha
Helix 21
AC3
C
33 43Right-handed alpha
Helix 22
AC4
C
58 63Right-handed alpha
Helix 23
AC5
C
64 73Right-handed alpha
Helix 24
AC6
C
146 159Right-handed alpha
Helix 25
AC7
C
172 184Right-handed alpha
Helix 26
AC8
C
187 203Right-handed alpha
Helix 27
AC9
C
212 219Right-handed alpha
Helix 28
AD1
C
220 223Right-handed 310
Helix 29
AD2
C
226 238Right-handed alpha
Helix 30
AD3
C
243 258Right-handed alpha
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There are 9 sheets in PDB entry 8EWO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 9first strand
Strand 2
A
13 20anti-parallel
Strand 3
A
25 29anti-parallel
Strand 4
A
48 53parallel
Strand 5
A
75 79parallel
Strand 6
A
89 91parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 99first strand
Strand 2
A
102 108anti-parallel
Strand 3
A
117 121anti-parallel
Strand 4
A
127 131anti-parallel
Strand 5
A
165 168parallel
Strand 6
A
210 211anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 135first strand
Strand 2
A
138 139anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 9first strand
Strand 2
B
13 20anti-parallel
Strand 3
B
25 29anti-parallel
Strand 4
B
48 53parallel
Strand 5
B
75 79parallel
Strand 6
B
89 91parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
96 99first strand
Strand 2
B
102 108anti-parallel
Strand 3
B
117 121anti-parallel
Strand 4
B
127 131anti-parallel
Strand 5
B
165 168parallel
Strand 6
B
210 211anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
134 135first strand
Strand 2
B
138 139anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 9first strand
Strand 2
C
13 20anti-parallel
Strand 3
C
25 29anti-parallel
Strand 4
C
48 53parallel
Strand 5
C
75 79parallel
Strand 6
C
89 91parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
96 99first strand
Strand 2
C
102 108anti-parallel
Strand 3
C
117 121anti-parallel
Strand 4
C
127 131anti-parallel
Strand 5
C
165 168parallel
Strand 6
C
210 211anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
134 135first strand
Strand 2
C
138 139anti-parallel
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