Analysis of interatomic Contacts of Structural Units in PDB entry:
8EWU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EWU entry

There are 2 chains in PDB entry 8EWU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 0GLN 352
B
 HIS -1GLN 352
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 8EWU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 27Right-handed alpha
Helix 2
AA2
A
44 56Right-handed alpha
Helix 3
AA3
A
69 76Right-handed alpha
Helix 4
AA4
A
76 98Right-handed alpha
Helix 5
AA5
A
108 112Right-handed 310
Helix 6
AA6
A
121 125Right-handed 310
Helix 7
AA7
A
131 133Right-handed 310
Helix 8
AA8
A
134 156Right-handed alpha
Helix 9
AA9
A
180 197Right-handed alpha
Helix 10
AB1
A
199 208Right-handed alpha
Helix 11
AB2
A
211 221Right-handed alpha
Helix 12
AB3
A
244 258Right-handed alpha
Helix 13
AB4
A
259 265Right-handed alpha
Helix 14
AB5
A
285 297Right-handed alpha
Helix 15
AB6
A
319 326Right-handed alpha
Helix 16
AB7
A
332 347Right-handed alpha
Helix 17
AB8
B
14 27Right-handed alpha
Helix 18
AB9
B
44 56Right-handed alpha
Helix 19
AC1
B
69 76Right-handed alpha
Helix 20
AC2
B
76 98Right-handed alpha
Helix 21
AC3
B
108 112Right-handed 310
Helix 22
AC4
B
121 125Right-handed 310
Helix 23
AC5
B
131 133Right-handed 310
Helix 24
AC6
B
134 156Right-handed alpha
Helix 25
AC7
B
180 197Right-handed alpha
Helix 26
AC8
B
199 208Right-handed alpha
Helix 27
AC9
B
211 221Right-handed alpha
Helix 28
AD1
B
244 258Right-handed alpha
Helix 29
AD2
B
259 265Right-handed alpha
Helix 30
AD3
B
285 297Right-handed alpha
Helix 31
AD4
B
319 326Right-handed alpha
Helix 32
AD5
B
332 345Right-handed alpha
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There are 8 sheets in PDB entry 8EWU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 33first strand
Strand 2
A
7 10parallel
Strand 3
A
59 62parallel
Strand 4
A
102 106parallel
Strand 5
A
159 164parallel
Strand 6
A
275 277parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 168first strand
Strand 2
A
241 243parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
228 232first strand
Strand 2
A
301 305parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 239first strand
Strand 2
A
283 284anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 33first strand
Strand 2
B
7 10parallel
Strand 3
B
59 62parallel
Strand 4
B
102 106parallel
Strand 5
B
159 164parallel
Strand 6
B
275 277parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
166 168first strand
Strand 2
B
241 243parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
228 232first strand
Strand 2
B
301 305parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
238 239first strand
Strand 2
B
283 284anti-parallel
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