Analysis of interatomic Contacts of Structural Units in PDB entry:
8EWV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8EWV entry

There are 12 chains in PDB entry 8EWV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	VAL 102
B	MET 17	CYS 112
C	PRO 61	ILE 206
D	THR 60	GLU 168
E	MET 1	VAL 102
F	MET 17	CYS 112
G	PRO 61	ILE 206
H	THR 60	GLU 168
I	MET 1	VAL 102
J	MET 17	CYS 112
K	PRO 61	ILE 206
L	THR 60	TYR 65

There are103 helices in PDB entry 8EWV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	23	36	Right-handed alpha
Helix 2	AA2	A	38	42	Right-handed 310
Helix 3	AA3	A	57	61	Right-handed 310
Helix 4	AA4	B	33	38	Right-handed alpha
Helix 5	AA5	B	39	46	Right-handed alpha
Helix 6	AA6	B	66	83	Right-handed alpha
Helix 7	AA7	B	96	111	Right-handed alpha
Helix 8	AA8	C	157	170	Right-handed alpha
Helix 9	AA9	C	181	183	Right-handed 310
Helix 10	AB1	C	184	189	Right-handed alpha
Helix 11	AB2	C	193	204	Right-handed alpha
Helix 12	AB3	D	61	69	Right-handed alpha
Helix 13	AB4	D	69	76	Right-handed alpha
Helix 14	AB5	D	77	85	Right-handed 310
Helix 15	AB6	D	96	101	Right-handed alpha
Helix 16	AB7	D	108	116	Right-handed alpha
Helix 17	AB8	D	123	140	Right-handed alpha
Helix 18	AB9	D	144	161	Right-handed alpha
Helix 19	AC1	D	162	164	Right-handed 310
Helix 20	AC2	E	23	36	Right-handed alpha
Helix 21	AC3	E	38	42	Right-handed 310
Helix 22	AC4	E	57	61	Right-handed 310
Helix 23	AC5	F	33	38	Right-handed alpha
Helix 24	AC6	F	39	46	Right-handed alpha
Helix 25	AC7	F	66	84	Right-handed alpha
Helix 26	AC8	F	96	111	Right-handed alpha
Helix 27	AC9	G	157	170	Right-handed alpha
Helix 28	AD1	G	171	175	Right-handed 310
Helix 29	AD2	G	182	190	Right-handed alpha
Helix 30	AD3	G	197	204	Right-handed alpha
Helix 31	AD4	H	61	69	Right-handed alpha
Helix 32	AD5	H	69	76	Right-handed alpha
Helix 33	AD6	H	77	85	Right-handed 310
Helix 34	AD7	H	88	93	Right-handed alpha
Helix 35	AD8	H	95	101	Right-handed alpha
Helix 36	AD9	H	106	116	Right-handed alpha
Helix 37	AE1	H	121	140	Right-handed alpha
Helix 38	AE2	H	144	162	Right-handed alpha
Helix 39	AE3	I	23	32	Right-handed alpha
Helix 40	AE4	I	38	42	Right-handed 310
Helix 41	AE5	I	57	61	Right-handed 310
Helix 42	AE6	J	33	38	Right-handed alpha
Helix 43	AE7	J	39	47	Right-handed alpha
Helix 44	AE8	J	66	84	Right-handed alpha
Helix 45	AE9	J	99	111	Right-handed alpha
Helix 46	AF1	K	157	170	Right-handed alpha
Helix 47	AF2	K	182	190	Right-handed alpha
Helix 48	AF3	K	193	204	Right-handed alpha
Helix 49	AF4	L	61	69	Right-handed alpha
Helix 50	AF5	L	69	76	Right-handed alpha
Helix 51	AF6	L	81	85	Right-handed 310
Helix 52	AF7	L	95	101	Right-handed alpha
Helix 53	AF8	L	106	116	Right-handed alpha
Helix 54	AF9	L	121	140	Right-handed alpha
Helix 55	AG1	L	144	162	Right-handed alpha
Helix 56	AG2	M	23	36	Right-handed alpha
Helix 57	AG3	M	57	61	Right-handed 310
Helix 58	AG4	N	33	37	Right-handed alpha
Helix 59	AG5	N	39	46	Right-handed alpha
Helix 60	AG6	N	66	83	Right-handed alpha
Helix 61	AG7	N	96	98	Right-handed 310
Helix 62	AG8	N	99	109	Right-handed alpha
Helix 63	AG9	O	157	167	Right-handed alpha
Helix 64	AH1	O	171	178	Right-handed 310
Helix 65	AH2	O	183	190	Right-handed alpha
Helix 66	AH3	O	193	204	Right-handed alpha
Helix 67	AH4	P	61	69	Right-handed alpha
Helix 68	AH5	P	69	76	Right-handed alpha
Helix 69	AH6	P	107	116	Right-handed alpha
Helix 70	AH7	P	121	140	Right-handed alpha
Helix 71	AH8	P	145	162	Right-handed alpha
Helix 72	AH9	Q	23	36	Right-handed alpha
Helix 73	AI1	Q	38	42	Right-handed 310
Helix 74	AI2	R	33	38	Right-handed alpha
Helix 75	AI3	R	39	46	Right-handed alpha
Helix 76	AI4	R	66	83	Right-handed alpha
Helix 77	AI5	R	101	111	Right-handed alpha
Helix 78	AI6	S	157	170	Right-handed alpha
Helix 79	AI7	S	174	178	Right-handed 310
Helix 80	AI8	S	193	204	Right-handed alpha
Helix 81	AI9	T	61	69	Right-handed alpha
Helix 82	AJ1	T	69	76	Right-handed alpha
Helix 83	AJ2	T	81	85	Right-handed 310
Helix 84	AJ3	T	88	93	Right-handed alpha
Helix 85	AJ4	T	95	101	Right-handed alpha
Helix 86	AJ5	T	106	115	Right-handed alpha
Helix 87	AJ6	T	121	141	Right-handed alpha
Helix 88	AJ7	T	144	163	Right-handed alpha
Helix 89	AJ8	U	23	35	Right-handed alpha
Helix 90	AJ9	V	33	37	Right-handed alpha
Helix 91	AK1	V	39	46	Right-handed alpha
Helix 92	AK2	V	66	83	Right-handed alpha
Helix 93	AK3	V	96	111	Right-handed alpha
Helix 94	AK4	W	157	168	Right-handed alpha
Helix 95	AK5	W	182	189	Right-handed alpha
Helix 96	AK6	W	194	204	Right-handed alpha
Helix 97	AK7	X	61	69	Right-handed alpha
Helix 98	AK8	X	69	76	Right-handed alpha
Helix 99	AK9	X	81	85	Right-handed 310
Helix 100	AL1	X	95	101	Right-handed alpha
Helix 101	AL2	X	106	116	Right-handed alpha
Helix 102	AL3	X	121	140	Right-handed alpha
Helix 103	AL4	X	144	162	Right-handed alpha

There are 20 sheets in PDB entry 8EWV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	45	first strand
Strand 2	A	73	78	anti-parallel
Strand 3	A	2	9	parallel
Strand 4	A	12	19	anti-parallel
Strand 5	B	28	32	parallel
Strand 6	B	18	22	anti-parallel
Strand 7	B	59	61	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	95	97	first strand
Strand 2	C	84	89	anti-parallel
Strand 3	C	117	121	anti-parallel
Strand 4	C	127	130	anti-parallel
Strand 5	C	151	152	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	49	50	first strand
Strand 2	E	44	46	anti-parallel
Strand 3	E	73	77	anti-parallel
Strand 4	E	2	9	parallel
Strand 5	E	12	19	anti-parallel
Strand 6	F	28	32	parallel
Strand 7	F	18	22	anti-parallel
Strand 8	F	59	61	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	106	112	first strand
Strand 2	G	71	78	anti-parallel
Strand 3	G	147	152	parallel
Strand 4	G	129	130	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	95	97	first strand
Strand 2	G	84	89	anti-parallel
Strand 3	G	117	121	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	17	19	first strand
Strand 2	I	2	8	anti-parallel
Strand 3	I	73	77	parallel
Strand 4	I	44	45	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	17	19	first strand
Strand 2	I	2	8	anti-parallel
Strand 3	I	12	14	anti-parallel
Strand 4	J	28	32	parallel
Strand 5	J	18	22	anti-parallel
Strand 6	J	59	61	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	107	112	first strand
Strand 2	K	71	76	anti-parallel
Strand 3	K	147	148	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	95	97	first strand
Strand 2	K	84	89	anti-parallel
Strand 3	K	117	121	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	129	130	first strand
Strand 2	K	151	152	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	73	74	first strand
Strand 2	M	2	9	parallel
Strand 3	M	12	19	anti-parallel
Strand 4	N	28	32	parallel
Strand 5	N	18	22	anti-parallel
Strand 6	N	59	61	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	106	112	first strand
Strand 2	O	71	78	anti-parallel
Strand 3	O	147	152	parallel
Strand 4	O	129	130	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	95	97	first strand
Strand 2	O	84	89	anti-parallel
Strand 3	O	116	121	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	73	76	first strand
Strand 2	Q	2	8	parallel
Strand 3	Q	12	19	anti-parallel
Strand 4	R	28	32	parallel
Strand 5	R	18	22	anti-parallel
Strand 6	R	59	61	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	45	46	first strand
Strand 2	Q	49	50	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	107	109	first strand
Strand 2	S	74	77	anti-parallel
Strand 3	S	147	152	parallel
Strand 4	S	129	130	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	95	97	first strand
Strand 2	S	85	89	anti-parallel
Strand 3	S	117	120	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	74	76	first strand
Strand 2	U	6	9	parallel
Strand 3	U	12	15	anti-parallel
Strand 4	V	28	32	parallel
Strand 5	V	18	22	anti-parallel
Strand 6	V	59	61	parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	107	112	first strand
Strand 2	W	71	79	anti-parallel
Strand 3	W	147	152	parallel
Strand 4	W	129	130	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	95	97	first strand
Strand 2	W	84	89	anti-parallel
Strand 3	W	117	121	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8EWV

Analysis of interatomic Contacts of Structural Units in PDB entry:
8EWV